A

Anfang, N., Brajkovich, M. and Goddard, Matthew R. (2009) Co-fermentation with Pichia kluyveri increases varietal thiol concentrations in sauvignon blanc. Australian Journal of Grape and Wine Research, 15 (1). pp. 1-8. ISSN 1322-7130

Angell, J. W., Clegg, S. R., Grove-White, D. H., Blowey, R. W., Carter, S. D., Duncan, J. S. and Evans, N. J. (2017) Survival of contagious ovine digital dermatitis (CODD)-associated treponemes on disposable gloves after handling CODD-Affected feet. Veterinary Record, 181 (4). p. 89. ISSN 0042-4900

Anvarian, Amir, Smith, MP and Overton, TW (2019) Flow cytometry and growth‐based analysis of the effects of fruit sanitation on the physiology of Escherichia coli in orange juice. Food Science and Technology . pp. 1-12. ISSN 2048-7177

Anvarian, Amir, Smith, MP and Overton, TW (2018) Use of flow cytometry and total viable count to determine the effects of orange juice composition on the physiology of Escherichia coli. Food Science and Nutrition . ISSN 2048-7177

C

Clegg, S. R., Crosby-Durrani, H. E., Bell, J., Blundell, R., Blowey, R. W., Carter, S. D. and Evans, N. J. (2016) Detection and isolation of digital dermatitis treponemes from bovine pressure sores. Journal of Comparative Pathology, 154 (4). pp. 273-282. ISSN 0021-9975

Clegg, S. R., Sullivan, L. E., Bell, J., Blowey, R. W., Carter, S. D. and Evans, N. J. (2016) Detection and isolation of digital dermatitis treponemes from skin and tail lesions in pigs. Research in Veterinary Science, 104 . pp. 64-70. ISSN 0034-5288

Clegg, Simon, Angell, Joseph, Grove-White, Dai, Carter, Stuart, Duncan, Jennifer, Evans, Nicholas and Blowey, Roger (2017) Reducing lameness in sheep. Veterinary Record, 181 (6). p. 149. ISSN 0042-4900

Clegg, Simon R., Carter, Stuart D., Birtles, Richard J., Brown, Jennifer M., Hart, C. Anthony and Evans, Nicholas J. (2016) Multilocus sequence typing of pathogenic treponemes isolated from cloven-hoofed animals and comparison to treponemes isolated from humans. Applied and Environmental Microbiology, 82 (15). pp. 4523-4536. ISSN 1098-5336

Crosby-Durrani, H. E., Clegg, S. R., Singer, E., Angell, J. W., Evans, N. J., Carter, S. D., Blundell, R. J. and Duncan, J. S. (2016) Severe foot lesions in dairy goats associated with digital dermatitis treponemes. Journal of Comparative Pathology, 154 (4). pp. 283-296. ISSN 0021-9975

E

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

F

Fernandez-Huarte, Matias, Elphinstone, John, Adams, Ian, Vicente, Joana, Bhogal, Anne, Watson, Christine, Dussart, Francois, Stockdale, Elizabeth, Walshaw, John, McGreig, Sam, Simmonds, Robert, Maskova, Lucie, Deeks, Lynda and Goddard, Matthew (2023) A DNA-barcode biodiversity standard analysis method (DNA-BSAM) reveals a large variance in the effect of range of biological, chemical and physical soil management interventions at different sites, but that location is one of the most important aspects determining the nature of agricultural soil microbiology. Soil Biology and Biogeochemistry, 184 . p. 109104. ISSN 0038-0717

G

Gayevskiy, Velimir and Goddard, Matthew R. (2012) Geographic delineations of yeast communities and populations associated with vines and wines in New Zealand. ISME Journal, 6 (7). pp. 1281-1290. ISSN 1751-7362

Giraldo-Perez, Paulina, Raw, Victoria, Greven, Marc and Goddard, Matthew (2021) A small effect of conservation agriculture on soil biodiversity that differs between biological kingdoms and geographic locations. iScience, 24 (4). p. 102280. ISSN 2589-0042

Glendinning, Laura, Wright, Steven, Tennant, Peter, Gill, Andrew C., Collie, David, McLachlan, Gerry and Drake, Harold L. (2017) Microbiota in exhaled breath condensate and the lung. Applied and Environmental Microbiology, 83 (12). e00515-17. ISSN 0099-2240

Goddard, Matthew, O'Brien, Sarah, Williams, Nicola, Guitian, Javier, Grant, Andrew, Cody, Alison, Colles, Frances, Buffet, Jean-Charles, Adlen, Ella, Stephens, Andrea, Godfray, H. Charles J. and Maiden, Martin C. J. (2022) A restatement of the natural science evidence base regarding the source, spread and control of Campylobacter species causing human disease. Proceedings of the Royal Society B: Biological Sciences, 289 (1976). ISSN 0962-8452

H

Harsch, Michael J., Lee, Soon A., Goddard, Matthew R. and Gardner, Richard C. (2009) Optimized fermentation of grape juice by laboratory strains of Saccharomyces cerevisiae. FEMS Yeast Research, 10 (1). pp. 72-82. ISSN 1567-1356

Hawkins, Diana Lynne, Ryder, Jess, Lee, Soon A., Parish-Virtue, Katie, Fedrizzi, Bruno, Goddard, Matthew and Knight, Sarah J. (2023) Mixed yeast communities contribute to regionally distinct wine attributes. FEMS Yeast Research . ISSN 1567-1356

J

Jones, Rory, Fountain, Michelle, Andreani, Nadia, Gunther, Catrin and Goddard, Matthew (2022) The relative abundances of yeasts attractive to Drosophila suzukii differ between fruit types and are greatest on raspberries. Scientific Reports, 12 . p. 10382. ISSN 2045-2322

K

Knight, Sarah and Goddard, Matthew R. (2015) Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation. The ISME Journal, 9 (2). pp. 361-370. ISSN 1751-7362

Knight, Sarah, Klaere, Steffen, Fedrizzi, Bruno and Goddard, Matthew (2015) Regional microbial signatures positively correlate with differential wine phenotypes: evidence for a microbial aspect to terroir. Scientific Reports, 5 . p. 14233. ISSN 2045-2322

Knight, Sarah, Klaere, Steffen, Morrison-Whittle, Peter and Goddard, Matthew (2018) Fungal diversity during fermentation correlates with thiol concentrations in wine. Australian Journal of Grape and Wine Research, 24 (1). pp. 105-112. ISSN 1322-7130

M

Morrison-Whittle, Peter and Goddard, Matthew (2017) Fungal communities are differentially affected by conventional and biodynamic agricultural management approaches in vineyard ecosystems. Agriculture, Ecosystems and Environment, 246 . pp. 306-313. ISSN 0167-8809

Morrison-Whittle, Peter and Goddard, Matthew (2015) Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities. The ISME Journal, 9 (9). pp. 2003-2011. ISSN 1751-7362

Morrison-Whittle, Peter and Goddard, Matthew R. (2018) From vineyard to winery: a source map of microbial diversity driving wine fermentation. Environmental Microbiology, 20 (1). pp. 75-84. ISSN 1462-2912

N

Newbrook, Kerry, Staton, Gareth J., Clegg, Simon R., Birtles, Richard J., Carter, Stuart D. and Evans, Nicholas J. (2017) Treponema ruminis sp. nov., a spirochaete isolated from the bovine rumen. International Journal of Systematic and Evolutionary Microbiology, 67 (5). pp. 1349-1354. ISSN 1466-5026

R

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

S

Schofield, Benjamin, Andreani, Nadia, Gunther, Catrin, Law, Graham, McMahon, Gary, Swainson, Mark and Goddard, Matthew (2022) Livestock microbial landscape patterns: retail poultry microbiomes significantly vary by region and season. Food Microbiology, 101 . p. 103878. ISSN 0740-0020

Sullivan, L. E., Evans, N. J., Blowey, R. W., Grove-White, D. H., Clegg, S. R., Duncan, J. S. and Carter, S. D. (2015) A molecular epidemiology of treponemes in beef cattle digital dermatitis lesions and comparative analyses with sheep contagious ovine digital dermatitis and dairy cattle digital dermatitis lesions. Veterinary Microbiology, 178 (1-2). pp. 77-87. ISSN 0378-1135

T

Taylor, Michael W., Tsai, Peter, Anfang, Nicole, Ross, Howard A. and Goddard, Matthew R. (2014) Pyrosequencing reveals regional differences in fruit-associated fungal communities. Environmental Microbiology, 16 (9). pp. 2848-2858. ISSN 1462-2912