16S rRNA

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

16S rRNA Amplicon sequencing

Andreani, Nadia, Donaldson, Caroline and Goddard, Matthew (2020) A reasonable correlation between cloacal and caecal microbiomes in broiler chickens. Poultry Science, 99 (11). pp. 6062-6070. ISSN 0032-5791

3Rs

Andreani, Nadia, Donaldson, Caroline and Goddard, Matthew (2020) A reasonable correlation between cloacal and caecal microbiomes in broiler chickens. Poultry Science, 99 (11). pp. 6062-6070. ISSN 0032-5791

Acinetobacter baumannii

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Africa

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

Tembo, John, Maluzi, Kwitaka, Egbe, Franklyn and Bates, Matthew (2021) Covid-19 in Africa. BMJ . n457. ISSN 1756-1833

Africa; Antimicrobial resistance; Livestock-associated-MRSA; Pigs; Staphylococcus aureus; Systematic review

Samutela, Mulemba Tillika, Kwenda, Geoffrey, Simulundu, Edgar, Nkhoma, Panji, Higashi, Hideaki, Frey, Andrew, Bates, Matthew and Hang'ombe, Bernard M. (2021) Pigs as a potential source of emerging livestock-associated Staphylococcus aureus in Africa: a systematic review. International Journal of Infectious Diseases, 109 . pp. 38-49. ISSN 1201-9712

Animal Diseases

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

Sanyal, A., Mohapatra, J. K., Kumar, R. Manoj, Biswas, S., Hemadri, D., Tosh, C., Sabarinath, G. P., Gupta, S. K., Mittal, M., Giridharan, P. and Bandyopadhyay, S. K. (2004) Complete nucleotide sequence analysis of a vaccine strain and a field isolate of foot-and-mouth disease virus serotype Asia1 with an insertion in VP1 genomic region. Acta Virologica, 48 (3). pp. 159-66. ISSN 0001-723X

Animal RNA virus

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2005) Genetic comparison of large fragment of the 5'untranslated region among foot-and-mouth disease viruses with special reference to serotype Asia1. Archives of Virology, 150 (11). pp. 2217-2239. ISSN 0304-8608

Animal Virus

Sanyal, A., Mohapatra, J. K., Kumar, R. Manoj, Biswas, S., Hemadri, D., Tosh, C., Sabarinath, G. P., Gupta, S. K., Mittal, M., Giridharan, P. and Bandyopadhyay, S. K. (2004) Complete nucleotide sequence analysis of a vaccine strain and a field isolate of foot-and-mouth disease virus serotype Asia1 with an insertion in VP1 genomic region. Acta Virologica, 48 (3). pp. 159-66. ISSN 0001-723X

Autops

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

BAY 57-1293

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Ruebsamen-Schaeff, Helga, Zimmermann, Holger and Field, Hugh J. (2010) Effects of therapy using a helicase-primase inhibitor (HPI) in mice infected with deliberate mixtures of wild-type HSV-1 and an HPI-resistant UL5 mutant. Antiviral Research, 87 (1). pp. 67-73. ISSN 0166-3542

Bacillus (bacterium)

Ferreira, William T., Hong, Huynh A., Adams, James R. G., Hess, Mateusz, Kotowicz, Natalia K., Tan, Sisareuth, Ferrari, Enrico, Brisson, Alain, Zentek, Jurgen, Soloviev, Mikhail and Cutting, Simon M. (2022) Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance. Biomedicines, 10 (5). p. 930. ISSN 2227-9059

Caecal microbiome

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

Children

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

Clostridioides difficile infection

Ferreira, William T., Hong, Huynh A., Adams, James R. G., Hess, Mateusz, Kotowicz, Natalia K., Tan, Sisareuth, Ferrari, Enrico, Brisson, Alain, Zentek, Jurgen, Soloviev, Mikhail and Cutting, Simon M. (2022) Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance. Biomedicines, 10 (5). p. 930. ISSN 2227-9059

Clostridium perfringens

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

Cytomegalovirus

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

DNA Virus

Field, Hugh J., Biswas, Subhajit and Mohammad, Islam T. (2006) Herpesvirus latency and therapy--from a veterinary perspective. Antiviral Research, 71 (2-3). pp. 127-133. ISSN 0166-3542

Diagnostics

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

EDCTP}

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Genomes

Staton, Gareth J., Clegg, Simon R., Ainsworth, Stuart, Armstrong, Stuart, Carter, Stuart D., Radford, Alan D., Darby, Alistair, Wastling, Jonathan, Hall, Neil and Evans, Nicholas J. (2021) Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. PLOS Pathogens, 17 (3). e1009464. ISSN 1553-7374

HPI-resistant mutants

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

HSV

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Ruebsamen-Schaeff, Helga, Zimmermann, Holger and Field, Hugh J. (2010) Effects of therapy using a helicase-primase inhibitor (HPI) in mice infected with deliberate mixtures of wild-type HSV-1 and an HPI-resistant UL5 mutant. Antiviral Research, 87 (1). pp. 67-73. ISSN 0166-3542

HSV-1

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

Helicase primase complex

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

Host

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Microbiology

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

Sanyal, A., Mohapatra, J. K., Kumar, R. Manoj, Biswas, S., Hemadri, D., Tosh, C., Sabarinath, G. P., Gupta, S. K., Mittal, M., Giridharan, P. and Bandyopadhyay, S. K. (2004) Complete nucleotide sequence analysis of a vaccine strain and a field isolate of foot-and-mouth disease virus serotype Asia1 with an insertion in VP1 genomic region. Acta Virologica, 48 (3). pp. 159-66. ISSN 0001-723X

Molecular phylogenetics

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

Mycobacterium africanum

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Mycobacterium tuberculosis complex

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Necrotic enteritis

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

Pneumocystis Jirovecii pneumonia}

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

Pneumonia

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

Post mortem

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

RNA structure

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2005) Genetic comparison of large fragment of the 5'untranslated region among foot-and-mouth disease viruses with special reference to serotype Asia1. Archives of Virology, 150 (11). pp. 2217-2239. ISSN 0304-8608

RNA virus

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Gupta, S. K., Mittal, M., Mohapatra, J. K., Sabarinath, G. P., Kumar, R. Manoj and Bandyopadhyay, S. K. (2004) Sequence analysis of Vpg protein of Asia-1 field isolates of Foot and Mouth Disease Virus in India. Journal of Animal and Veterinary Advances, 3 (8). pp. 522-526. ISSN 1680-5593

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

Sanyal, A., Mohapatra, J. K., Kumar, R. Manoj, Biswas, S., Hemadri, D., Tosh, C., Sabarinath, G. P., Gupta, S. K., Mittal, M., Giridharan, P. and Bandyopadhyay, S. K. (2004) Complete nucleotide sequence analysis of a vaccine strain and a field isolate of foot-and-mouth disease virus serotype Asia1 with an insertion in VP1 genomic region. Acta Virologica, 48 (3). pp. 159-66. ISSN 0001-723X

SARS-CoV-2

Tembo, John, Maluzi, Kwitaka, Egbe, Franklyn and Bates, Matthew (2021) Covid-19 in Africa. BMJ . n457. ISSN 1756-1833

T

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Treponema

Staton, Gareth J., Clegg, Simon R., Ainsworth, Stuart, Armstrong, Stuart, Carter, Stuart D., Radford, Alan D., Darby, Alistair, Wastling, Jonathan, Hall, Neil and Evans, Nicholas J. (2021) Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. PLOS Pathogens, 17 (3). e1009464. ISSN 1553-7374

Tuberculosis

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

Vaccines

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

Veterinary Antivirals

Field, Hugh J., Biswas, Subhajit and Mohammad, Islam T. (2006) Herpesvirus latency and therapy--from a veterinary perspective. Antiviral Research, 71 (2-3). pp. 127-133. ISSN 0166-3542

Veterinary Medicine

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2005) Genetic comparison of large fragment of the 5'untranslated region among foot-and-mouth disease viruses with special reference to serotype Asia1. Archives of Virology, 150 (11). pp. 2217-2239. ISSN 0304-8608

Sanyal, A., Mohapatra, J. K., Kumar, R. Manoj, Biswas, S., Hemadri, D., Tosh, C., Sabarinath, G. P., Gupta, S. K., Mittal, M., Giridharan, P. and Bandyopadhyay, S. K. (2004) Complete nucleotide sequence analysis of a vaccine strain and a field isolate of foot-and-mouth disease virus serotype Asia1 with an insertion in VP1 genomic region. Acta Virologica, 48 (3). pp. 159-66. ISSN 0001-723X

Virology

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2005) Genetic comparison of large fragment of the 5'untranslated region among foot-and-mouth disease viruses with special reference to serotype Asia1. Archives of Virology, 150 (11). pp. 2217-2239. ISSN 0304-8608

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

Field, Hugh J., Biswas, Subhajit and Mohammad, Islam T. (2006) Herpesvirus latency and therapy--from a veterinary perspective. Antiviral Research, 71 (2-3). pp. 127-133. ISSN 0166-3542

Virus evolution

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Gupta, S. K., Mittal, M., Mohapatra, J. K., Sabarinath, G. P., Kumar, R. Manoj and Bandyopadhyay, S. K. (2004) Sequence analysis of Vpg protein of Asia-1 field isolates of Foot and Mouth Disease Virus in India. Journal of Animal and Veterinary Advances, 3 (8). pp. 522-526. ISSN 1680-5593

Zambia

Bates, Matthew, Shibemba, Aaron, Mudenda, Victor, Chimoga, Charles, Tembo, John, Kabwe, Mwila, Chilufya, Moses, Hoelscher, Michael, Maeurer, Markus, Sinyangwe, Sylvester, Mwaba, Peter, Kapata, Nathan and Zumla, Alimuddin (2016) Burden of respiratory tract infections at post mortem in Zambian children. BMC Medicine, 14 (1). p. 99. ISSN 1741-7015

allochthonous bacteria

Ferreira, William T., Hong, Huynh A., Adams, James R. G., Hess, Mateusz, Kotowicz, Natalia K., Tan, Sisareuth, Ferrari, Enrico, Brisson, Alain, Zentek, Jurgen, Soloviev, Mikhail and Cutting, Simon M. (2022) Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance. Biomedicines, 10 (5). p. 930. ISSN 2227-9059

antibiotic resistance

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

antimicrobial peptides

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

antiviral

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

antiviral resistance

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Ruebsamen-Schaeff, Helga, Zimmermann, Holger and Field, Hugh J. (2010) Effects of therapy using a helicase-primase inhibitor (HPI) in mice infected with deliberate mixtures of wild-type HSV-1 and an HPI-resistant UL5 mutant. Antiviral Research, 87 (1). pp. 67-73. ISSN 0166-3542

antivirals

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Ruebsamen-Schaeff, Helga, Zimmermann, Holger and Field, Hugh J. (2010) Effects of therapy using a helicase-primase inhibitor (HPI) in mice infected with deliberate mixtures of wild-type HSV-1 and an HPI-resistant UL5 mutant. Antiviral Research, 87 (1). pp. 67-73. ISSN 0166-3542

atomic force microscopy

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

biofilm

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

bmjaccents

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

cattle

Staton, Gareth J., Clegg, Simon R., Ainsworth, Stuart, Armstrong, Stuart, Carter, Stuart D., Radford, Alan D., Darby, Alistair, Wastling, Jonathan, Hall, Neil and Evans, Nicholas J. (2021) Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. PLOS Pathogens, 17 (3). e1009464. ISSN 1553-7374

colistin

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

coronavirus

Tembo, John, Maluzi, Kwitaka, Egbe, Franklyn and Bates, Matthew (2021) Covid-19 in Africa. BMJ . n457. ISSN 1756-1833

cross-resistance

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

diagnostics

Zumla, Alimuddin, Ippolito, Giuseppe, McCloskey, Brian, Bates, Matthew, Ansumana, Rashid, Heymann, David, Kock, Richard and Ntoumi, Francine (2017) Enhancing preparedness for tackling new epidemic threats. Lancet Respiratory Medicine, 5 (8). pp. 606-608. ISSN 2213-2600

drug-resistance

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

ebola

Zumla, Alimuddin, Ippolito, Giuseppe, McCloskey, Brian, Bates, Matthew, Ansumana, Rashid, Heymann, David, Kock, Richard and Ntoumi, Francine (2017) Enhancing preparedness for tackling new epidemic threats. Lancet Respiratory Medicine, 5 (8). pp. 606-608. ISSN 2213-2600

emeringing infectious diseases

Zumla, Alimuddin, Ippolito, Giuseppe, McCloskey, Brian, Bates, Matthew, Ansumana, Rashid, Heymann, David, Kock, Richard and Ntoumi, Francine (2017) Enhancing preparedness for tackling new epidemic threats. Lancet Respiratory Medicine, 5 (8). pp. 606-608. ISSN 2213-2600

environmental bacteria

Ferreira, William T., Hong, Huynh A., Adams, James R. G., Hess, Mateusz, Kotowicz, Natalia K., Tan, Sisareuth, Ferrari, Enrico, Brisson, Alain, Zentek, Jurgen, Soloviev, Mikhail and Cutting, Simon M. (2022) Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance. Biomedicines, 10 (5). p. 930. ISSN 2227-9059

extbackslashAfrica

Zumla, Alimuddin, Otchere, Isaac Darko, Mensah, Gloria Ivy, Asante-Poku, Adwoa, Gehre, Florian, Maeurer, Markus, Bates, Matthew, Mwaba, Peter, Ntoumi, Francine and Yeboah-Manu, Dorothy (2017) Learning from epidemiological, clinical, and immunological studies on Mycobacterium africanum for improving current understanding of host-pathogen interactions, and for the development and evaluation of diagnostics, host-directed therapies, and vaccines for tuberculosis. International Journal of Infectious Diseases, 56 (SI). pp. 126-129. ISSN 1201-9712

growth curve

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

helicase

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

herpes simplex

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

humans

Staton, Gareth J., Clegg, Simon R., Ainsworth, Stuart, Armstrong, Stuart, Carter, Stuart D., Radford, Alan D., Darby, Alistair, Wastling, Jonathan, Hall, Neil and Evans, Nicholas J. (2021) Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. PLOS Pathogens, 17 (3). e1009464. ISSN 1553-7374

intentional mismatch primer PCR

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

lameness

Staton, Gareth J., Clegg, Simon R., Ainsworth, Stuart, Armstrong, Stuart, Carter, Stuart D., Radford, Alan D., Darby, Alistair, Wastling, Jonathan, Hall, Neil and Evans, Nicholas J. (2021) Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. PLOS Pathogens, 17 (3). e1009464. ISSN 1553-7374

latent infection

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

lipopeptides

Ferreira, William T., Hong, Huynh A., Adams, James R. G., Hess, Mateusz, Kotowicz, Natalia K., Tan, Sisareuth, Ferrari, Enrico, Brisson, Alain, Zentek, Jurgen, Soloviev, Mikhail and Cutting, Simon M. (2022) Environmentally Acquired Bacillus and Their Role in C. difficile Colonization Resistance. Biomedicines, 10 (5). p. 930. ISSN 2227-9059

molecular phylogeny

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Gupta, S. K., Mittal, M., Mohapatra, J. K., Sabarinath, G. P., Kumar, R. Manoj and Bandyopadhyay, S. K. (2004) Sequence analysis of Vpg protein of Asia-1 field isolates of Foot and Mouth Disease Virus in India. Journal of Animal and Veterinary Advances, 3 (8). pp. 522-526. ISSN 1680-5593

mouse infection model

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

murine infection model

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Ruebsamen-Schaeff, Helga, Zimmermann, Holger and Field, Hugh J. (2010) Effects of therapy using a helicase-primase inhibitor (HPI) in mice infected with deliberate mixtures of wild-type HSV-1 and an HPI-resistant UL5 mutant. Antiviral Research, 87 (1). pp. 67-73. ISSN 0166-3542

mutation

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

nucleoside analogues

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

phylogenomics

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

plaque reduction assay

Biswas, Subhajit and Field, Hugh J. (2011) Helicase–primase inhibitors: a new approach to combat herpes simplex virus and varicella zoster virus. In: Antiviral Drug Strategies. Methods and Principles in Medicinal Chemistry . Wiley-VCH Verlag GmbH & Co. KGaA, pp. 129-146. ISBN 9783527635955, 9783527326969

poultry

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

poultry microbiome

Andreani, Nadia, Donaldson, Caroline and Goddard, Matthew (2020) A reasonable correlation between cloacal and caecal microbiomes in broiler chickens. Poultry Science, 99 (11). pp. 6062-6070. ISSN 0032-5791

primase

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

resistance

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Sukla, Soumi, Biswas, Subhajit, Birkmann, Alexander, Lischka, Peter, Zimmermann, Holger and Field, Hugh J. (2010) Mismatch primer-based PCR reveals that helicase-primase inhibitor resistance mutations pre-exist in herpes simplex virus type 1 clinical isolates and are not induced during incubation with the inhibitor. Journal of Antimicrobial Chemotherapy, 65 (7). pp. 1347-1352. ISSN 0305-7453

toxin

Kiu, Raymond, Brown, Joseph, Bedwell, Harley, Leclaire, Charlotte, Caim, Shabhonam, Pickard, Derek, Dougan, Gordon, Dixon, Ronald A. and Hall, Lindsey J. (2019) Genomic analysis on broiler-associated Clostridium perfringens strains and exploratory caecal microbiome investigation reveals key factors linked to poultry necrotic enteritis. Animal Microbiome, 1 (12). pp. 1-14. ISSN 2524-4671

vesicle leakage

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

veterinary medicine

Biswas, S., Sanyal, A., Hemadri, D., Tosh, C., Mohapatra, J. K., Kumar, R. Manoj and Bandyopadhyay, S. K. (2006) Sequence analysis of the non-structural 3A and 3C protein-coding regions of foot-and-mouth disease virus serotype Asia1 field isolates from an endemic country. Veterinary Microbiology, 116 (1-3). pp. 187-193. ISSN 0378-1135

virology

Zumla, Alimuddin, Ippolito, Giuseppe, McCloskey, Brian, Bates, Matthew, Ansumana, Rashid, Heymann, David, Kock, Richard and Ntoumi, Francine (2017) Enhancing preparedness for tackling new epidemic threats. Lancet Respiratory Medicine, 5 (8). pp. 606-608. ISSN 2213-2600

virus

Biswas, Subhajit and Field, Hugh J. (2008) Herpes simplex virus helicase-primase inhibitors: recent findings from the study of drug resistance mutations. Antiviral Chemistry & Chemotherapy, 19 (1). pp. 1-6. ISSN 0956-3202

Biswas, Subhajit, Nunez Miguel, Ricardo, Sukla, Soumi and Field, Hugh J. (2009) A mutation in helicase motif IV of herpes simplex virus type 1 UL5 that results in reduced growth in vitro and lower virulence in a murine infection model is related to the predicted helicase structure. Journal of General Virology, 90 (8). pp. 1937-1942. ISSN 0022-1317

Biswas, Subhajit, Tiley, Laurence S., Zimmermann, Holger, Birkmann, Alexander and Field, Hugh J. (2008) Mutations close to functional motif IV in HSV-1 UL5 helicase that confer resistance to HSV helicase-primase inhibitors, variously affect virus growth rate and pathogenicity. Antiviral Research, 80 (1). pp. 81-85. ISSN 0166-3542

zika

Zumla, Alimuddin, Ippolito, Giuseppe, McCloskey, Brian, Bates, Matthew, Ansumana, Rashid, Heymann, David, Kock, Richard and Ntoumi, Francine (2017) Enhancing preparedness for tackling new epidemic threats. Lancet Respiratory Medicine, 5 (8). pp. 606-608. ISSN 2213-2600