Items where Subject is "C500 Microbiology"

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16S rRNA gene 16S sequencing ?-amylase AMR ANAMMOX AP-1 ARGs ATP binding cassette transporters Abiotic conditions Accident prevention Acne Acne vulagaris Actinobacteria Adaptation, Physiological Aflatoxin B1 Agriculture Alexandrium spp. and turbulence Algal blooms Alkali stress Almonds Alphaproteobacteria Amino Acid Sequence Antarctic waters} Anti-Infective Agents Anti-tumor Antibiotic resistance Antibiotics susceptibility Anticancer agents Antimicrobial Antimicrobial peptides Antimicrobial resistance Apoptosis Aquatic environments Arabidopsis thaliana Archaea Arctic Ocean Artificial inoculation Athletes Atomic force microscopy B lymphocyte B-Lymphocytes BITOX BOTOX Bacillariophyta Bacillus Bacillus (bacterium) Bacillus licheniformis Bacillus sp. Bacillus subtilis Bacteria Bacteria (microorganisms) Bacterial Physiological Phenomena Bacterial Proteins Bacterial Typing Techniques Bacterial biofilm Bacterial heterotrophic productio Bacterial production Bacterial removal Bacteriocin Bacteriology Bacteriophage Bacterioplankton composition Bacterium Base Sequence Benghazi Benghazi region Betaproteobacteria Bioassay Biochemistry Biodegradation, Environmental Biodeterioration Biodiesel Biodiversity Biofilm Biofilm formation Biofilms Biogeochemical Biomolecules Blotting, Southern Blue mozzarella Boundary shear stress Brazil nuts Bursa of Fabricius CD4+ T lymphocyte CD8+ T lymphocyte CXCL10 Callianassa subterranea Cancer Cancer drug resistance Carbohydrates Carbon Carrier Proteins Cation Transport Proteins Cdc37p;Sti1 Cell Size Cell wall Cells Cells, Cultured Cellulose Acetate Chaperone inhibitors Chemical communication Chemostat culture Chickens Chromogenic agar Chromosome Mapping Chromosomes, Bacterial Ciliophora Clathrin Cloning Cloning, Molecular Cluster Analysis Coastal osmotrophic plankton Colicin Colicin E3 Collagen accumulation Colletotrichum Colony Count, Microbial Community Community structures Compact dry Comparative genomics and transcriptomics Compositional characterization Compositional shifts Conjugation, Genetic Conservation Conservation of Natural Resources Conserved Sequence Conventional ISO methods Crabtree effect Crops Cryoconite Cucumis melo Cyanobacteria Cycloclasticus Cytokines Cytoskeleton D-Value DGGE DNA DNA DNA hybridization DNA Helicases DNA Nucleotidyltransferases DNA Primers DNA Probes DNA Transposable Elements DNA fingerprinting DNA fragment DNA fragment, bacterial genetics DNA sequence DNA template DNA, Bacterial DNA, Fungal DNA, Ribosomal DNA, Viral DNA, plasmid, article DNA-Binding Proteins DNA-Directed DNA Polymerase Decapoda (Crustacea) Deltaproteobacteria Denaturing gradient gel electrophoresis Denitrification Detection of Escherichia coli DNA Dextranase expression Diatoms Didinium nasutum Dimethylsulfid Dimethylsulfoniopropionate Discrete time control systems Dissimilatory nitrate reduction Dose-Response Relationship, Drug Dose-Response Relationship, Immunologic Drinking water Drinking water distribution system Drinking water distribution systems Drosophila Drug Resistance, Microbial Drug Synergism Drug labelling Drug resistance E. coli EMSA East Africa Eastern Hemisphere Ecology Ecosystem Electrophoresis End-labelling England Enterobacteriaceae Enteroccoccus faecium Environmental Environmental Microbiology Environmental Pollutants Enzymes Episodic meteorological forcing Equipment Design Escherichia coli Eschericia coli Essex England Estuaries Estuarine sediments Eukaryota Eurasia Europe Evaluation Studies Evolution Evolution, Molecular Expression analysis Fab1p Fabaceae Fatty Acids Fault diagnosis Fault tolerant control Feathers Female Fermentation Fermented meat product Fertilizers Finite automata Finite state machines Firmicutes Fish Fish analysis Flagellate grazing Flow condition Flow cytometry Fluorescent in situ hybridization Fluorescent labels Food hazards Food hygiene and safety Food law compliance Food safety Food spoilage Food web Foodborne Diseases Foodborne outbreaks Fresh Water Functional genes Fungal Proteins Fungal protein Fungi Fusarium Fusarium solani Gallus gallus Gammaproteobacteria Geldanamycin Gels Gene Amplification Gene Transfer, Horizontal Gene function Genes Genes, Bacterial Genes, Regulator Genetic Predisposition to Disease Genetic Techniques Genetic Variation Genetic potential Geologic Sediments Ghanaian schools Glacier Glomales Glomerales Glomerella tucumanensis Glycoproteins Good hygiene practices (GHP) Gram negative bacterium Gram positive bacterium Gram-Negative Bacteria Gram-Positive Bacteria Grazing rates Grazing resistance Great Britain Growth potential Haematonectria haematococca Haematonectria haematococca mpVI Haemophilus influenzae Haplotypes Haptophyceae Heat shock protein Heat shock response Heat shock transcription factor Heat treatment Heritage Herpesviridae Herpesvirus 2, Gallid Heterotrophic activity High-throughput Hot oil Hsp90 Hsp90 inhibitor resistance Hsp90 inhibitors Hsp90 mutants Human rhinovirus Hybrid protein Hydrocarbons Hydrocarbons, Aromatic IFN response factors IFN-?–inducible protein of 10 kd In-situ Indicator bacteria Indonesia Innate immunity Inoculation Inoculation, Soils, carbon Inorganic nitrogen Insect debridement therapy Insufflation Intervention Iron sensing JCNotOpen JCOpen Kakamega Kenya Kinase Kitchen staff KrF laser L-allo-enduracididine L.sericata Lactic Acid Bacteria Landscape Lettuce Limestone Linkage (Genetics) Lipid II Listeria Listeria monotocytogenes Listeriosis Lucilia sericata Lung Lymphocyte Subsets MRSA MVB trafficking Macbecin Maghemite nanoparticles Malaria Malaria detection Mardivirus Marek Disease Marine ecosystems Marine systems Mass Spectrometry Mature Compost Meals Mediterranean} Membrane Proteins Membrane proteins Mercury Metabolomics Methacrylates Microbial Sensitivity Tests Microbial biofilm Microbial diversity Microbial ecology Microbiology Microbiome Microcrystalline Cellulose Microcystins Microcystis Microcystis aeruginosa Microsatellite Repeats Microscale patchiness Microscopy Minimal Medium Models, Biological Models, Genetic Molecular Sequence Data Molecular structure Molybdate Mosaicism Mss4p Mucosal immunity Multilocus Sequence Typing Mutualism Mycelium Mycobacterium tuberculosis Mycological Typing Techniques Mycotoxin Mycotoxin bioassay N. vespilloides Near-wall Nectria Negibacteria Nicrophorus vespilloides Nitrate concentration Nitrate reduction Nitrite Reductases Nitrite reductase genes Nitrite reductase genes, Estuaries, messenger RNA Nitrogen Nitrogen Compounds Nitrogen Fixation Nitrogen compounds Nitrogen removal NotOAChecked Nucleic Acid Conformation Nucleic Acid Hybridization Nutrient gradients Nutrient inputs Nutrients Nutritional supplements Ochrobactrum Ochrobactrum anthropi Oleispira antarctica Oligonucleotide Probes Oprf porin Organic carbon Outer membrane proteins Oxidation-Reduction P. luminescens PDR12 Paracoccus Partition systems Pathogens Peas Penicillium minioluteum Peptides, Cyclic Pesticides Pharmacogenetics Phosphates Phosphatidylinositol bisphosphate Phospholipids Photoautotrophs Phylogeny Pilot scale Pipe Pipe flow Pisum sativum Planktonic bacterivory Plant Diseases Plasmid Plasmids Plasmids, Bacteria (microorganisms) Plasmodium Plasmodium falciparum Poecilochirus carabi Polymerase Chain Reaction Polymorphism, Restriction Fragment Length Polymyxin B Polysaccharides Population Posibacteria Potable water Primary production Process activities Process control Prokaryota Prokaryotic Protein kinase Protein level Proteins Proteobacteria Proteomics Protista Pseudoalteromonas Pseudomonas Pseudomonas aeruginosa Pseudomonas fluorescens Pseudomonas fluorescens group Pumpkin seeds Pyrimidines Quantitative PCR RAPD-PCR RNA RNA 16S RNA 16S, abundance RNA 16S, ammonification RNA 16S, article RNA 16S, bacterium RNA 16S, denitrification RNA 16S, microbial community, agriculture RNA 18S, arbuscular mycorrhiza RNA fingerprinting RNA sequence RNA, Acinetobacter RNA, Antisense RNA, Bacterial RNA, Good agricultural practice (GAP) RNA, Messenger RNA, Polymorphism, Soils, RNA 16S, bacterial disease RNA, Ribosomal, 16S RNA, Ribosomal, 18S RNA, ammonification RNA, amplicon Radicicol Radiolabelled Recombinases Recombination, Genetic Refrigerator Regression analysis Replication Origin Reproducibility of Results Republic of Congo Resistance Respiration Reverse Transcriptase Polymerase Chain Reaction Reverse transcription Review Ribonuclease Ribosome River Humber Roseobacter SARS-CoV-2 Virus Surrogate SNAREs SWD Saccaromyces cerevisiae Saccharomyces Saccharomyces cerevisiae Saccharomyces cerevisiae, Saccharomyces cerevisiae Saccharomycetaceae Salmonela enterica Salmonella Sampling devices Sanitation Saudi Arabia Scanning electron microscopy School meals Seawater Sediment resuspension Sediments Sediments, Bacterial community Sediments, Gene sequences, Genes, DNA Selective and Non-selective media Senior High Schools Sequence Analysis, DNA Sequence Homology, Nucleic Acid Sequence Homology, Nucleic Acid, Eurasia Set theory Shewanella Shewanella sp. Siderophores Simultaneous analysis, Biofilms Skin Skin measurements Slurry experiment Social evolution Soil Soil Microbiology Soil Microbiology, Bacteria (microorganisms) Soil Pollutants Species Specificity Species Specificity, Bacteria (microorganisms) Sphingomonas Stainless steel Staphylococcus aureus Sti1p Streptococcus pneumoniae; Cefotaxime; moxifloxacin; azithromycin; Teixobactin-Arg10 Streptomyces Stress resistance Stress response Students Sub-Saharan Africa Substrate Specificity, Acinetobacter Sulfolobus Sulfur Supershift Supervision, Control system analysis Support, Non-U.S. Gov't Support, Non-U.S. Gov't, Bacteria (microorganisms) Systems Theory T-Lymphocytes TRAP1 Taq polymerase, DNA Primers Teixobactins Tellurium Temperate estuary Temperature Temperature, Alcanivorax Terrestrial runoff Thailand, Bacteria (microorganisms) Thalassolituus Thalassolituus oleivorans Thermal treatment Time Factors Time series Time-temperature Tolerance Trachea Training Trans-Activators Trans-Activators, Bacteria (microorganisms) Transcription Transcription factor Transcription, Estuarine sediments Transcription, Genetic Transfer functions, Discrete event systems Translation Transposases Transposon Resolvases Treatment-specific shifts, Biofilms, beta glucosidase Trees Triticum aestivum Triticum, Bacteria (microorganisms) Tropical Climate, Africa Troubleshooting Tuberculosis Turbulence in laboratory containers Tyrosine, Bacteria (microorganisms) URTI UV Ultrasound imaging United Kingdom United Kingdom, Bacterial Proteins United Kingdom, Biodegradation, Environmental United States United kingdom, Ammonium compounds Upogebia deltaura VRE Variation (Genetics) Variation (Genetics), Bacteria (microorganisms) Variation (Genetics), United Kingdom, Bacteria (microorganisms) Variovorax Verapamil Vesicle leakage Vibrio Vibrio parahaemolyticus Vibrio sp. Vibrio, Alphaproteobacteria Viola (angiosperm), Anti-Bacterial Agents Viral Load Virulence, Fungi Virus Replication, Gallid herpesvirus 2 Viscosity, Colpidium striatum Wastewater treatment, Nitrates, ammonia Water Microbiology Water Microbiology, Bacteria (microorganisms) Water Microbiology, Colne Estuary Water Pollutants, Chemical, Bacteria (microorganisms) Water Pollution, Chemical Water Supply, Bacteria (microorganisms) Water activity Water distribution systems Water supply, Biofilters, 4',6 diamidino 2 phenylindole Waves Weak acid Western Europe, Bacillariophyta Western Europe, Bacteria (microorganisms) Western Europe, Deltaproteobacteria World, Bacteria (microorganisms) Wound healing Wounds Y-chromosonal STR Yeast Zea mays ac accessory genome acclimatization acne acne vulgaris actin active site adaptation adherance agricultural management agricultural procedures airway epithelial cell alpha interferon alternative model amber amino acids aminopeptidase ammonium amplicon sequencing amyloid beta protein1-40 amyloid beta protein1-42 amyloid forming host defence peptide ancient DNA animal experiment animal model animal tissue antibacterial antibacterial activity antibacterial potency antibiotic resistance antibiotic susceptibility antibiotics antiinfective agent antimicrobial antimicrobial resistance antimicrobial resistance gene antimicrobials arbuscular mycorrhiza aromatic hydrocarbon article asthma autosomal STR autotrophy azoxystrobin bacteria bacteria in experimental degradation bacterial DNA bacterial activity bacterial community bacterial count bacterial flora bacterial gene bacterial genetics bacterial growth bacterial membrane bacterial membranes bacterial metabolism bacterial outer membrane bacterial protein bacterial shape bacteriophage bacterioplankton abundance bacterium bacterium colony bacterium isolate bacterium isolation benthic environment benthos benzoquinone ans amycins radicicol beta interferon binding affinity bioassays bioavailability biodegradation biodiversity biofilm biofilms; denaturing gradient gel electrophoresis;drinking water; enumeration; water age; water quality biolog biological activity biological model biomass bioprocessing bioremediation bioturbation bladder biopsies bmjconvert bmjdoi bmjgoldcheck bmjtype body size body temperature botulinum neurotoxin burrow cancer carbohydrate carbohydrate derivative carbohydrate metabolism carbon carbon cycle carbon isotope carboxy terminal sequence catalysis causal microbe cell death cell envelope cell level cell membrane permeability cell permeabilization cellular DNA conten cellular organisms chemical communication chemotaxis chicken chilled storage chlorophyll a chloroquine chromogenic media chromosome ciliate classification clinical isolates cluster analysis co-occurrence coastal sediment colicin E3 colonisation commercialisation community composition community structure comparative study competitive interactions complementary DNA concentration (composition) concentration (parameters) concentration response confocal microscopy conjugation consensus sequence controlled study correlation crustacean crystal violet cyanoginosin cyclic polypeptides cyclopeptide cyclotide cycloviolacin O2 cytology dander darkness de novo resistance degradation degradation of 700 year old human bone denaturing gradient gel electrophoresis denitrification destruction of archaeological bone detection method diatom diet dinoflagellates direction persistence disease predisposition diversity dna sequence dose response drinking water drinking water, biofilm drug binding site drug derivative drug effect drug labelling drug potentiation drug receptor binding drug resistance drug synthesis ecdysal cyst ecological niche ecology ecosystem ectoenzyme effile poultry electrokinesis electrophoresis endotoxins endurance exercise environmental isolates environmental monitoring environmental sampling enzyme activity enzyme localization enzyme specificity error escherichia coli estuarine ecosystem estuarine environment estuarine sediment estuarine species estuary ethanol evolution excretion/secretion exopolymer experimental evolution expression vector extracellular polymeric substances (EPS) fatty acid fermentation fertilizer fertilizer application flagella flow cytometry fluorescence analysis fluorescence in situ hybridization fluorescent-labelled chloroquine fluorescent-tagged drug probes food food preservation food safety food spoilage fresh produce fridge fruit functional diversity fungal DNA, DNA fungal community fungal disease fungal gene fungal strain fungal virulence fungal–plant interaction fungi fungicide fungus fungus culture fungus isolation gamma interferon gene gene amplification gene content turnover gene expression gene expression regulation gene function gene identification gene isolation gene library gene locus gene pool gene product gene repertoire gene replication gene sequence gene transfer gene-flow genetic analysis genetic conservation genetic data genetic database genetic linkage genetic marker genetic polymorphism genetic recombination genetic transcription genetic variability genetic variance genetics genome genome evolution genome fluidity genotype geographic distribution geography giblets glacial environment glycoprotein gram negative bacterium gram positive bacterium greater wax moth growth inhibition growth, development and aging habitat harvesting heat treatment helicase helicase, article herpes virus infection heterozygosity horizontal gene transfer host host defence peptide host-microbe interactions host-pathogen interactions human hybridization hydrocarbon hydrophobicity immunity in vitro resistance infectivity influenza inoculation insect insect model insect pest insecticide resistance interferon production interleukin 18 interleukin 4 interleukin 6 interstitial cystitis intracellular growth isolates isolation and purification isotope labeling isotretinoin treatment kalata B1 kalata B2 laboratory evaluation lake water lancovutide land use lanthiopeptin lantibiotic larval ES larval excretion larval secretion legume light exposure lipase lipid analysis lipophorin lung alveolus cell lymphocyte depletion lysozyme macrophage malaria management practice marine environment maximin H5 medicinal maggot Lucilia sericata membrane membrane binding membrane vesicles mercury mercury, antibiotic resistance mercury, article mercury, bacterial metabolism messenger RNA meta-analysis metabolic neutralisation metabolic profiling metabolism metabolite metal metabolism methanol extraction residue, article methodology microalga microbe recovery microbes microbial activity microbial biomass microbial community microbial community structure microbial degradation microbial diversity microbial ecology microbial growth microbial infections microbial metabolism microbial pathogens microbial physiology microbial population dynamics microbial stress response microbiological examination, Bacteria (microorganisms) microbiology microcosm microflora microsatellite marker microscope mineralization minimum inhibitory concentration mode of action moenomycin molecular analysis molecular biology molecular chaperone molecular cloning molecular diagnosis molecular dynamics molecular genetics molecular phylogeny morphology mosaicism motility multigene family multivariate analysis mutagenesis mutualism mycobiome napA gene narG gene natural history nervous system net growth rate neutral ecology niche nirS gene nitrate nitrate reductase nitric oxide nitrite nitrite reductase nitrogen nitrogen cycle nonhuman nontarget organism note nrfa gene nuclear factor ?B nucleotide sequence nutrient availability nutrient cycling nutrient flux nutrient uptake nutrition nuts oaopen oligonucleotide oligonucleotide probe oligonucleotide, amino acid sequence operator gene operon orange juice orbital shaking osmotrophic planktonic community oxic/anoxic interface parasitology partially eviscerated particulate organic nitrogen passive microrheology pathogen dynamics pathogenesis pathogenic bacteria pathogenicity pathogens. pea peptide peptide analysis peptide synthesis persistence pesticide pesticide, 25s rrna gene petroleum petroleum, Alcanivorax phenoloxidase phenotype phenotypic screening phosphate phosphatidylethanolamine phospholipid phosphorus photosynthesis phylogenetic comparative methods phylogenetics phylogeny phylosymbiosis physical property physiology phytobenthos phytoplankton plant disease plasmid plasmid dna plowing policy decision pollutant, Alcanivoraceae pollution polyacrylamide gel electrophoresis polychlorinated biphenyl polymer, Bacteria (microorganisms) polymerase chain reaction polymerase chain reaction, agricultural land polymerase chain reaction, article polymorphism polymyxin polymyxin B polymyxin B nonapeptide polymyxin B, absorption polymyxin nonapeptide polysaccharide population population genetics poultry production powdered infant formula (PIF) primary production primer DNA, abundance primer DNA, article principal component analysis priority journal productivity programmed cell death promoter region protein protein engineering qualitative analysis quantitative analysis real time polymerase chain reaction recombinase recovery bone reduction regulator gene relative abundance replicon reproducibility resolvase resolvase, adaptation respiratory tract infection restriction enzyme analysis restriction fragment restriction fragment length polymorphism reverse transcription polymerase chain reaction review, Bacillus review, DNA Transposable Elements ribonuclease ribosomal ribosome DNA ribosome RNA risk assessment salinity sampling screening sea water, article seashore seasonal variation sediment sediment analysis sediment, Animals sediment, Bacteria sediment-water interface seeds sequence analysis sequence analysis, Bacillus licheniformis sequence analysis, Bacteria sequence homology sequence homology, Amino Acid Sequence sequence homology, Base Sequence shape shear stress shewanella short survey, Ecology silver colloid skin bacteria small-scale turbulence soil soil analysis, Agriculture soil health soil microflora soil microflora, Base Sequence soil microorganism soil pollutant soil pollution soil pollution, Bacillus sp. soil pollution, Base Sequence soil pollution, Biodegradation, Environmental soil type, agriculture soil, Agriculture species diversity species diversity, agricultural species species diversity, animal species endemicity species habitat species richness, Bacteria spleen standard, DNA, Complementary strain identification stramenopiles structure activity relation, Bacillus (bacterium) summer surface roughness surface treatment swimming swimming speed} synapse systems microbiology target cell technique, Bacteria teixobactin tellurite temperature textural attachment preferences tidal cycle, Colne Estuary toxicity test, article toxicity, Crystallization toxin dynamics trait dimensions trans acting factor, article transforming growth factor beta, animal cell transposase, article transposon transposon, Bacteriophages transposons tree tropic climate, Agriculture tropical region tumble bias turbulence unclassified drug, antimicrobial activity unclassified drug, article unclassified drug, bacterium viable but non-culturable (VBNC) viable but nonculturable viremia virus replication virus resistance, Animals viscosity viscosity, Acclimatization water column, Fiji water pollutant, Bacteria water pollution, Bacteria water sampling water supply, Bacteria water supply, article wheat whole genome sequencing wine winter, Agriculture xanthomonas yeast yeast, Databases, Nucleic Acid
Number of items at this level: 1884.

16S rRNA gene

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

16S sequencing

Anvarian, Amir H. P., Cao, Yu, Srikumar, Shabarinath, Fanning, Séamus and Jordan, Kieran (2016) Flow cytometric and 16S sequencing methodologies for monitoring the physiological status of the microbiome in powdered infant formula production. Frontiers in Microbiology, 7 (968). ISSN 1664-302X

?-amylase

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

AMR

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Willaims, Nicola and Onarinde, Bukola (2021) Assessing the impact of heat treatment on antimicrobial resistance genes and their potential uptake by other ‘live’ bacteria. Project Report. Food Standards Agency (FSA).

ANAMMOX

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

AP-1

Phelan, John P., Millson, Stefan H., Parker, Peter J., Piper, Peter W. and Cooke, Frank T. (2006) Fab1p and AP1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. Journal of Cell Science, 119 . pp. 4225-4234. ISSN 0021-9533

ARGs

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Willaims, Nicola and Onarinde, Bukola (2021) Assessing the impact of heat treatment on antimicrobial resistance genes and their potential uptake by other ‘live’ bacteria. Project Report. Food Standards Agency (FSA).

ATP binding cassette transporters

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Abiotic conditions

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Accident prevention

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Acne

Ryan-Kewley, Angela E. (2011) Microbial ecology of Propionibacterium acnes in patients undergoing treatment with isotretinoin. PhD thesis, University of Lincoln.

Acne vulagaris

Thomas, Angela E., Williams, D. Ross, Hepburn, Neil C., Watts, Toni and Dixon, Ron A. (2005) Staphylococcal microbiota from the skin of patients: changes associated with treatment by Isotretinoin. In: 15th European Congress of Clinical Microbiology and Infectious Diseases, 01 April to 15 April, 2005, Copenhagen.

Actinobacteria

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Adaptation, Physiological

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Aflatoxin B1

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

Agriculture

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Alexandrium spp. and turbulence

Bolli, L., Llaveria, G., Garces, E., Guadayol, Oscar, van Lenning, K., Peters, F. and Berdalet, E. (2007) Modulation of ecdysal cyst and toxin dynamics of two Alexandrium (Dinophyceae) species under small-scale turbulence. Biogeosciences, 4 (4). pp. 559-567. ISSN 1726-4170

Algal blooms

Pinhassi, Jarone, Sala, Maria Montserrat, Havskum, Harry, Peters, Francesc, Guadayol, Oscar, Malits, Andrea and Marrase, Celia (2004) Changes in bacterioplankton composition under different phytoplankton regimens. Applied and Environmental Microbiology, 70 (11). pp. 6753-6766. ISSN 0099-2240

Alkali stress

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Almonds

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Evaluation of selective and non-selective plating media for recovery of Salmonella enteritidis PT 30 (SEPT 30), Salmonella seftenberg 775W (775W) and Salmonella typhimurium DT 104 (DT 104) colonies from heat treated almonds. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Alphaproteobacteria

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Amino Acid Sequence

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Antarctic waters}

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Malits, Andrea and Pedros-Alio, Carlos (2009) Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54 (1). pp. 101-112. ISSN 0948-3055

Anti-Infective Agents

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Anti-tumor

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Antibiotic resistance

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Antibiotics susceptibility

Daramola, Bukola A., Williams, Ross and Dixon, Ron A. (2009) In vitro antibiotic susceptibility of Vibrio parahaemolyticus from environmental sources in Northern England. International Journal of Antimicrobial Agents, 34 (5). pp. 499-500. ISSN 0924-8579

Anticancer agents

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Antimicrobial

Parmar, Anish, Iyer, Abhishek, Lloyd, Daniel, Vincent, Charlotte, Prior, Stephen, Taylor, Edward and Singh, Ishwar (2017) Syntheses of potent teixobactin analogues against methicillin-resistant Staphylococcus aureus (MRSA) through the replacement of L-allo-enduracididine with its isosteres. Chemical Communications, 53 (55). pp. 7788-7791. ISSN 1359-7345

Antimicrobial peptides

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Antimicrobial resistance

Onarinde, Bukola, Zhao, Junren, Leonard, Justine and Dudkiewicz, Agnieszka (2019) Antimicrobial Resistance (AMR) Profiles of Lactic Acid Bacteria (LAB) Isolated from Fermented Meat Products of European Origin. In: IAFP'S European Symposium on Food Safety, 24 - 26 April, 2019, Nantes, France.

Apoptosis

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Aquatic environments

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Arabidopsis thaliana

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Archaea

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Arctic Ocean

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Angel-Ripoll, Laia, Terrado, Ramon, Lovejoy, Connie and Pedros-Alio, Carlos (2008) Seasonal changes in planktonic bacterivory rates under the ice-covered coastal Arctic Ocean. Limnology and Oceanography, 53 (6). pp. 2427-2438. ISSN 0024-3590

Artificial inoculation

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

Athletes

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Atomic force microscopy

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

B lymphocyte

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

B-Lymphocytes

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

BITOX

Ferrari, Enrico, Maywood, Elizabeth S., Restani, Laura, Caleo, Matteo, Pirazzini, Marco, Rossetto, Ornella, Hastings, Michael H., Niranjan, Dhevahi, Schiavo, Giampietro and Davletov, Bazbek (2011) Re-assembled botulinum neurotoxin inhibits CNS Functions without systemic toxicity. Toxins, 3 (4). pp. 345-355. ISSN 2072-6651

BOTOX

Ferrari, Enrico, Maywood, Elizabeth S., Restani, Laura, Caleo, Matteo, Pirazzini, Marco, Rossetto, Ornella, Hastings, Michael H., Niranjan, Dhevahi, Schiavo, Giampietro and Davletov, Bazbek (2011) Re-assembled botulinum neurotoxin inhibits CNS Functions without systemic toxicity. Toxins, 3 (4). pp. 345-355. ISSN 2072-6651

Bacillariophyta

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Bacillus

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Bacillus (bacterium)

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Bacillus licheniformis

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

Bacillus sp.

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Bacillus subtilis

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

Bacteria

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Eales, Marcus (2015) The visualisation of interactions between Acinetobacter baumannii and the antimicrobial peptides: colistin sulphate, bicarinalin and BP100. MRes thesis, University of Lincoln.

El baidouri, Fouad, Venditti, Chris and Humphries, Stuart (2017) Independent evolution of shape and motility allows evolutionary flexibility in Firmicutes bacteria. Nature Ecology & Evolution, 1 (1). 0009. ISSN 2397-334X

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Willaims, Nicola and Onarinde, Bukola (2021) Assessing the impact of heat treatment on antimicrobial resistance genes and their potential uptake by other ‘live’ bacteria. Project Report. Food Standards Agency (FSA).

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Williams, D. Ross and Chanos, Panagiotis (2012) Application of anti-listerial bacteriocins: monitoring enterocin expression by multiplex relative reverse transcription–PCR. Biochemical Society Transactions, 40 (6). pp. 1544-1548. ISSN 0300-5127

Bacteria (microorganisms)

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Bacterial Physiological Phenomena

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Bacterial Proteins

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Bacterial Typing Techniques

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Bacterial biofilm

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Bacterial heterotrophic productio

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Malits, Andrea and Pedros-Alio, Carlos (2009) Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54 (1). pp. 101-112. ISSN 0948-3055

Bacterial production

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Bacterial removal

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Bacteriocin

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Bacteriology

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Bacteriophage

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

Bacterioplankton composition

Pinhassi, Jarone, Sala, Maria Montserrat, Havskum, Harry, Peters, Francesc, Guadayol, Oscar, Malits, Andrea and Marrase, Celia (2004) Changes in bacterioplankton composition under different phytoplankton regimens. Applied and Environmental Microbiology, 70 (11). pp. 6753-6766. ISSN 0099-2240

Bacterium

Chanos, P. and Williams, D. R. (2011) Anti-Listeria bacteriocin-producing bacteria from raw ewe’s milk in northern Greece. Journal of Applied Microbiology, 110 (3). pp. 757-768. ISSN 1364-5072

Base Sequence

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Benghazi

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2011) Genetic data provided by 15 autosomal STR loci in the Libyan population living in Benghazi. In: 7th National FORREST Conference, 29 - 30 June 2011, Nottingham, UK.

Benghazi region

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2010) Haplotypes for 17 Y-chromosomal STR loci in a population from eastern Libya (Benghazi region). In: 7th International Y Chromosome User Workshop and 4th International EMPOP, 22 - 24 April 2010, Berlin, Germany.

Betaproteobacteria

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Bioassay

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

Biochemistry

Panaretou, Barry, Siligardi, Giuliano, Meyer, Philippe, Maloney, Alison, Sullivan, Janis K., Singh, Shradha, Millson, Stefan H., Clarke, Paul A., Naaby-Hansen, Soren, Stein, Rob, Cramer, Rainer, Mollapour, Mehdi, Workman, Paul, Piper, Peter W., Pearl, Laurence H. and Prodromou, Chrisostomos (2002) Activation of the ATPase activity of Hsp90 by the stress-regulated cochaperone Aha1. Molecular Cell, 10 (6). pp. 1307-1318. ISSN 1097-2765

Biodegradation, Environmental

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Biodeterioration

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Biodiesel

Uthandi, Sivakumar, Kaliyaperumal, Ashokkumar, Srinivasan, Naganandhini, Thangavelu, Kiruthika, Muniraj, Iniya Kumar, Zhan, Xinmin, Gathergood, Nicholas and Gupta, Vijai Kumar (2021) Microbial biodiesel production from lignocellulosic biomass: New insights and future challenges. Critical Reviews in Environmental Science and Technology . pp. 1-30. ISSN 1064-3389

Biodiversity

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Biofilm

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Biofilm formation

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Biofilms

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Biogeochemical

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Biomolecules

Molina, Gustavo, Gupta, Vijai, Singh, Brahma and Gathergood, Nicholas, eds. (2020) Bioprocessing for Biomolecules Production. Wiley. ISBN 9781119434320

Blotting, Southern

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Blue mozzarella

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Andreani, Nadia, Carraro, Lisa, Martino, Maria Elena, Fondi, Marco, Fasolato, Luca, Miotto, Giovanni, Magro, Massimiliano, Vianello, Fabio and Cardazzo, Barbara (2015) A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens. International Journal of Food Microbiology, 213 . pp. 88-98. ISSN 0168-1605

Boundary shear stress

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Brazil nuts

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Bursa of Fabricius

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

CD4+ T lymphocyte

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

CD8+ T lymphocyte

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

CXCL10

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

Callianassa subterranea

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Cancer

Prodromou, Chrisostomos, Nuttall, James M., Millson, Stefan H., Roe, S. Mark, Sim, Tiow-Suan, Tan, Doreen, Workman, Paul, Pearl, Laurence H. and Piper, Peter W. (2009) Structural basis of the radicicol resistance displayed by a fungal Hsp90. Acs Chemical Biology, 4 (4). pp. 289-297. ISSN 1554-8929

Cancer drug resistance

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Carbohydrates

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Carbon

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Carrier Proteins

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Cation Transport Proteins

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Cdc37p;Sti1

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Cell Size

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Cell wall

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Cells

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Cells, Cultured

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Cellulose Acetate

Degli-Innocenti, Francesco, Goglino, Giorgia, Tosin, Maurizio, Bellia, Gaetano, Monciardini, P and Cavalletti, L (2002) Isolation and characterisation of thermophilic micro-organisms able to grow on cellulose acetate. In: Microbiology of Composting. Springer, pp. 273-286. ISBN UNSPECIFIED

Chaperone inhibitors

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Chemical communication

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Chemostat culture

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Chickens

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Chromogenic agar

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

Chromosome Mapping

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Chromosomes, Bacterial

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Ciliophora

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Clathrin

Phelan, John P., Millson, Stefan H., Parker, Peter J., Piper, Peter W. and Cooke, Frank T. (2006) Fab1p and AP1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. Journal of Cell Science, 119 . pp. 4225-4234. ISSN 0021-9533

Cloning

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Cloning, Molecular

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Cluster Analysis

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Coastal osmotrophic plankton

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Colicin

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Colicin E3

Lancaster, Lorna, Savelsbergh, Andreas, Kleanthous, Colin, Wintermeyer, Wolfgang and Rodnina, Marina (2008) Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes. Molecular Microbiology, 69 (2). pp. 390-401. ISSN 0950-382X

Collagen accumulation

Rippon, M. G., Springett, K., Walmsley, R., Patrick, K. and Millson, S. (1998) Ultrasound assessment of skin and wound tissue: comparison with histology. Skin Research and Technology, 4 (3). pp. 147-154. ISSN 0909-752X

Colletotrichum

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Colony Count, Microbial

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Community

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Community structures

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Compact dry

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Comparative genomics and transcriptomics

Andreani, Nadia, Carraro, Lisa, Martino, Maria Elena, Fondi, Marco, Fasolato, Luca, Miotto, Giovanni, Magro, Massimiliano, Vianello, Fabio and Cardazzo, Barbara (2015) A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens. International Journal of Food Microbiology, 213 . pp. 88-98. ISSN 0168-1605

Compositional characterization

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Compositional shifts

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Conjugation, Genetic

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Conservation

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Conservation of Natural Resources

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Conserved Sequence

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Conventional ISO methods

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Crabtree effect

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

Crops

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Cryoconite

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Cucumis melo

Ortali, Arianna and Onarinde, Bukola (2021) Growth Potential of Listeria monocytogenes on Cantaloupe (cucumis melo) pulp evaluation under a dynamic time-temperature profile. In: ASM Microbe 2021, 20 - 24 June 2021, Online.

Cyanobacteria

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Cycloclasticus

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Cytokines

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Cytoskeleton

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

D-Value

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

DGGE

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

DNA

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

Hu, Bin, Liao, Chunyan, Millson, Stefan H., Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H., Piper, Peter W. and Panaretou, Barry (2005) Qri2/Nse4, a component of the essential Smc5/6 DNA repair complex: Nse4, an essential cell cycle protein. Molecular Microbiology, 55 (6). pp. 1735-1750. ISSN 0950-382X

Millson, Stefan H., Truman, Andrew W., King, Victoria, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

DNA DNA hybridization

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

DNA Helicases

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

DNA Nucleotidyltransferases

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

DNA Primers

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

DNA Probes

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

DNA Transposable Elements

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

DNA fingerprinting

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

DNA fragment

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

DNA fragment, bacterial genetics

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

DNA sequence

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

DNA template

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

DNA, Bacterial

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

DNA, Fungal

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

DNA, Ribosomal

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

DNA, Viral

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

DNA, plasmid, article

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

DNA-Binding Proteins

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

DNA-Directed DNA Polymerase

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Decapoda (Crustacea)

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Deltaproteobacteria

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Denaturing gradient gel electrophoresis

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Denitrification

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Detection of Escherichia coli DNA

Dixon, Ron and Agarwal, M. (2010) Detection of Escherichia coli DNA from interstitial cystitis bladder biopsies provides little evidence of a causal microbe. The Internet Journal of Urology, 7 (1). ISSN 1528-8390

Dextranase expression

Li, Xingmin, Millson, Stefan H., Coker, Raymond D. and Evans, Ivor H. (2006) Cloning and expression of Penicillium minioluteum dextranase in Saccharomyces cerevisiae and its exploitation as a reporter in the detection of mycotoxins. Biotechnology Letters, 28 . pp. 1955-1964. ISSN 0141-5492

Diatoms

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Didinium nasutum

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Dimethylsulfid

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Dimethylsulfoniopropionate

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Discrete time control systems

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Dissimilatory nitrate reduction

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Dose-Response Relationship, Drug

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Dose-Response Relationship, Immunologic

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Drinking water

Deines, P., Sekar, P., Jensen, H. S., Tait, S., Boxall, J. B., Osborn, A. M. and Biggs, C. A. (2010) MUWS (Microbiology in urban water systems): an interdisciplinary approach to study microbial communities in urban water systems. Drinking Water Engineering and Science, 3 (2). pp. 91-99. ISSN 1996-9457

Drinking water distribution system

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Drinking water distribution systems

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Drosophila

Gunther, Catrin, Knight, Sarah, Jones, Rory and Goddard, Matthew (2019) Are Drosophila preferences for yeasts stable or contextual? Ecology and Evolution, 9 (14). pp. 8075-8086. ISSN 2045-7758

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Drug Resistance, Microbial

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Drug Synergism

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Drug labelling

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Drug resistance

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Tan, Kevin and Lear, Martin (2010) Scientists tag malaria superbugs. Singapore Press Holdings.

E. coli

Anvarian, Amir, Smith, MP and Overton, TW (2018) Use of flow cytometry and total viable count to determine the effects of orange juice composition on the physiology of Escherichia coli. Food Science and Nutrition . ISSN 2048-7177

Gillett, Alice, Waugh, David, Lawrence, Jonathan, Swainson, Mark and Dixon, Ron (2016) Laser surface modification for the prevention of biofouling by infection causing Escherichia Coli. Journal of Laser Applications, 28 (2). 022503. ISSN 1042-346X

EMSA

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

East Africa

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Eastern Hemisphere

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Ecology

Goddard, Matthew R. (2016) Microbiology: mixing wine, chocolate, and coffee. Current Biology, 26 (7). R275-R277. ISSN 0960-9822

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Ecosystem

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Electrophoresis

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

End-labelling

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

England

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Enterobacteriaceae

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Enteroccoccus faecium

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Effect of added water and steam on the heat resistance of Salmonella enteritidis phage type 30 surrogate, Enterococcus faecium on blanched peanuts, cashews, pumpkin seeds, red skin peanuts and walnut. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Environmental

Daramola, Bukola A., Williams, Ross and Dixon, Ron A. (2009) In vitro antibiotic susceptibility of Vibrio parahaemolyticus from environmental sources in Northern England. International Journal of Antimicrobial Agents, 34 (5). pp. 499-500. ISSN 0924-8579

Environmental Microbiology

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Environmental Pollutants

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Enzymes

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Episodic meteorological forcing

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Equipment Design

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Escherichia coli

Anvarian, Amir, Smith, MP and Overton, TW (2019) Flow cytometry and growth‐based analysis of the effects of fruit sanitation on the physiology of Escherichia coli in orange juice. Food Science and Technology . pp. 1-12. ISSN 2048-7177

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

Eschericia coli

Dixon, Ron (2008) Role of the cell envelope in the antibacterial activities of cyclic polypeptides against Eschericia coli. In: 2nd World Conference on Magic Bullets, 3rd - 5th October 2008, Nuremberg, Germany.

Essex England

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Estuaries

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Estuarine sediments

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Eukaryota

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Eurasia

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Europe

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Evaluation Studies

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Evolution

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Evolution, Molecular

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Expression analysis

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Fab1p

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Phelan, John P., Millson, Stefan H., Parker, Peter J., Piper, Peter W. and Cooke, Frank T. (2006) Fab1p and AP1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. Journal of Cell Science, 119 . pp. 4225-4234. ISSN 0021-9533

Fabaceae

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Fatty Acids

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Fault diagnosis

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Fault tolerant control

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Feathers

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Female

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Fermentation

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Fermented meat product

Onarinde, Bukola, Zhao, Junren, Leonard, Justine and Dudkiewicz, Agnieszka (2019) Antimicrobial Resistance (AMR) Profiles of Lactic Acid Bacteria (LAB) Isolated from Fermented Meat Products of European Origin. In: IAFP'S European Symposium on Food Safety, 24 - 26 April, 2019, Nantes, France.

Fertilizers

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Finite automata

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Finite state machines

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Firmicutes

El baidouri, Fouad, Venditti, Chris and Humphries, Stuart (2017) Independent evolution of shape and motility allows evolutionary flexibility in Firmicutes bacteria. Nature Ecology & Evolution, 1 (1). 0009. ISSN 2397-334X

Fish

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Fish analysis

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Flagellate grazing

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Flow condition

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Flow cytometry

Anvarian, Amir, Smith, MP and Overton, TW (2019) Flow cytometry and growth‐based analysis of the effects of fruit sanitation on the physiology of Escherichia coli in orange juice. Food Science and Technology . pp. 1-12. ISSN 2048-7177

Fluorescent in situ hybridization

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Fluorescent labels

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Food hazards

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Food hygiene and safety

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Food law compliance

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Food safety

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Food spoilage

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Food web

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Foodborne Diseases

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Foodborne outbreaks

Aiyedun, Susanna, Onarinde, Bukola, Swainson, Mark and Dixon, Ron (2021) Foodborne Outbreaks of Microbial Infection from Fresh Produce in Europe And North America: A Systematic Review of Data from This Millennium. International Journal of Food Science and Technology, 56 (5). pp. 2215-2223. ISSN 0950-5423

Fresh Water

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Functional genes

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Fungal Proteins

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Fungal protein

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Fungi

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Morrison-Whittle, Peter and Goddard, Matthew (2015) Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities. The ISME Journal, 9 (9). pp. 2003-2011. ISSN 1751-7362

Fusarium

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Fusarium solani

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Gallus gallus

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Gammaproteobacteria

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Geldanamycin

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Gels

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Gene Amplification

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Gene Transfer, Horizontal

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Gene function

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Genes

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Genes, Bacterial

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Genes, Regulator

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Genetic Predisposition to Disease

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Genetic Techniques

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Genetic Variation

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Genetic potential

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Geologic Sediments

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

Ghanaian schools

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Glacier

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Glomales

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Glomerales

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Glomerella tucumanensis

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Glycoproteins

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Good hygiene practices (GHP)

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Gram negative bacterium

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Gram positive bacterium

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Gram-Negative Bacteria

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Gram-Positive Bacteria

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Grazing rates

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Malits, Andrea and Pedros-Alio, Carlos (2009) Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54 (1). pp. 101-112. ISSN 0948-3055

Grazing resistance

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Great Britain

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Growth potential

Ortali, Arianna and Onarinde, Bukola (2021) Growth Potential of Listeria monocytogenes on Cantaloupe (cucumis melo) pulp evaluation under a dynamic time-temperature profile. In: ASM Microbe 2021, 20 - 24 June 2021, Online.

Haematonectria haematococca

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Haematonectria haematococca mpVI

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Haemophilus influenzae

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Haplotypes

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2010) Haplotypes for 17 Y-chromosomal STR loci in a population from eastern Libya (Benghazi region). In: 7th International Y Chromosome User Workshop and 4th International EMPOP, 22 - 24 April 2010, Berlin, Germany.

Haptophyceae

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Heat shock protein

Millson, Stefan H., Truman, Andrew W., King, Victoria, Prodromou, Crisostomos, Pearl, Lawrence H. and Piper, Peter W. (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi, Prodromou, Chrisostomos and Piper, Peter W. (2007) In the yeast heat shock response, Hsf1-directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Heat shock response

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Heat shock transcription factor

Millson, S. H. and Piper, P. W. (2014) Insights from yeast into whether the rapamycin inhibition of heat shock transcription factor (Hsf1) can prevent the Hsf1 activation that results from treatment with an Hsp90 inhibitor. Oncotarget, 5 (13). pp. 5054-5064. ISSN 1949-2553

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Heat treatment

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Willaims, Nicola and Onarinde, Bukola (2021) Assessing the impact of heat treatment on antimicrobial resistance genes and their potential uptake by other ‘live’ bacteria. Project Report. Food Standards Agency (FSA).

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Evaluation of selective and non-selective plating media for recovery of Salmonella enteritidis PT 30 (SEPT 30), Salmonella seftenberg 775W (775W) and Salmonella typhimurium DT 104 (DT 104) colonies from heat treated almonds. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Heritage

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Herpesviridae

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Herpesvirus 2, Gallid

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Heterotrophic activity

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

High-throughput

Ch'ng, Jun-Hong, Mok, Sachel, Bozdech, Zbynek, Lear, Martin James, Boudhar, Aicha, Russell, Bruce, Nosten, Francois and Tan, Kevin Shyong-Wei (2013) A whole cell pathway screen reveals seven novel chemosensitizers to combat chloroquine resistant malaria. Scientific Reports, 3 (1734). ISSN 2045-2322

Hot oil

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

Hsp90

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Piper, Peter and Millson, Stefan (2012) Spotlight on the microbes that produce heat shock protein 90-targeting antibiotics. Open Biology, 2 (DEC). ISSN 2046-2441

Hsp90 inhibitor resistance

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Hsp90 inhibitors

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Hsp90 mutants

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Human rhinovirus

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

Hybrid protein

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Hydrocarbons

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Hydrocarbons, Aromatic

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

IFN response factors

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

IFN-?–inducible protein of 10 kd

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

In-situ

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Indicator bacteria

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Indonesia

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

Innate immunity

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Inoculation

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Inoculation, Soils, carbon

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Inorganic nitrogen

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Insect debridement therapy

Barnes, K. M., Gennard, Dorothy and Dixon, Ron (2010) The antibacterial potency of the medicinal maggot Lucilia sericata (Meigen): variation in laboratory evaluation. Journal of Microbiological Methods, 82 (3). pp. 234-237. ISSN 0167-7012

Insufflation

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Intervention

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Iron sensing

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

JCNotOpen

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Andreani, Nadia, Carraro, Lisa, Martino, Maria Elena, Fondi, Marco, Fasolato, Luca, Miotto, Giovanni, Magro, Massimiliano, Vianello, Fabio and Cardazzo, Barbara (2015) A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens. International Journal of Food Microbiology, 213 . pp. 88-98. ISSN 0168-1605

Gayevskiy, Velimir and Goddard, Matthew R. (2016) Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests. Environmental Microbiology, 18 (4). pp. 1137-1147. ISSN 1462-2920

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

JCOpen

Anvarian, Amir H. P., Cao, Yu, Srikumar, Shabarinath, Fanning, Séamus and Jordan, Kieran (2016) Flow cytometric and 16S sequencing methodologies for monitoring the physiological status of the microbiome in powdered infant formula production. Frontiers in Microbiology, 7 (968). ISSN 1664-302X

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

Knight, Sarah and Goddard, Matthew R. (2015) Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation. The ISME Journal, 9 (2). pp. 361-370. ISSN 1751-7362

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Loh, Cheryl C. Y., Suwanarusk, Rossarin, Lee, Yan Quan, Chan, Kitti W. K., Choy, Kit-Ying, Rénia, Laurent, Russell, Bruce, Lear, Martin J., Nosten, François H., Tan, Kevin S. W., Chow, Larry M. C. and Snounou, Georges (2014) Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay. PLoS ONE, 9 (10). e110800. ISSN 1932-6203

Millson, S. H. and Piper, P. W. (2014) Insights from yeast into whether the rapamycin inhibition of heat shock transcription factor (Hsf1) can prevent the Hsf1 activation that results from treatment with an Hsp90 inhibitor. Oncotarget, 5 (13). pp. 5054-5064. ISSN 1949-2553

Kakamega

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Kenya

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Kinase

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., King, Victoria, Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2006) Expressed in the yeast saccharomyces cerevisiae, human ERK5 Is a client of the Hsp90 chaperone that complements loss of the Slt2p (Mpk1p) cell Integrity stress-activated protein kinase. Eukaryotic Cell, 5 (11). pp. 1914-1924. ISSN 1535-9778

Kitchen staff

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

KrF laser

Gillett, Alice, Waugh, David, Lawrence, Jonathan, Swainson, Mark and Dixon, Ron (2016) Laser surface modification for the prevention of biofouling by infection causing Escherichia Coli. Journal of Laser Applications, 28 (2). 022503. ISSN 1042-346X

L-allo-enduracididine

Parmar, Anish, Iyer, Abhishek, Lloyd, Daniel, Vincent, Charlotte, Prior, Stephen, Taylor, Edward and Singh, Ishwar (2017) Syntheses of potent teixobactin analogues against methicillin-resistant Staphylococcus aureus (MRSA) through the replacement of L-allo-enduracididine with its isosteres. Chemical Communications, 53 (55). pp. 7788-7791. ISSN 1359-7345

L.sericata

Barnes, K. M., Dixon, Ron and Gennard, Dorothy (2009) A model of competitive interactions between L.sericata and pathogenic bacteria found on a corpse. In: European Association of Forensic Entomology, 9th - 12th June 2009, Uppsala, Sweden.

Lactic Acid Bacteria

Onarinde, Bukola, Zhao, Junren, Leonard, Justine and Dudkiewicz, Agnieszka (2019) Antimicrobial Resistance (AMR) Profiles of Lactic Acid Bacteria (LAB) Isolated from Fermented Meat Products of European Origin. In: IAFP'S European Symposium on Food Safety, 24 - 26 April, 2019, Nantes, France.

Landscape

Morrison-Whittle, Peter and Goddard, Matthew R. (2018) From vineyard to winery: a source map of microbial diversity driving wine fermentation. Environmental Microbiology, 20 (1). pp. 75-84. ISSN 1462-2912

Lettuce

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Limestone

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Linkage (Genetics)

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Lipid II

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Listeria

Williams, D. Ross and Chanos, Panagiotis (2012) Application of anti-listerial bacteriocins: monitoring enterocin expression by multiplex relative reverse transcription–PCR. Biochemical Society Transactions, 40 (6). pp. 1544-1548. ISSN 0300-5127

Listeria monotocytogenes

Ortali, Arianna and Onarinde, Bukola (2021) Growth Potential of Listeria monocytogenes on Cantaloupe (cucumis melo) pulp evaluation under a dynamic time-temperature profile. In: ASM Microbe 2021, 20 - 24 June 2021, Online.

Listeriosis

Williams, D. Ross and Chanos, Panagiotis (2012) Application of anti-listerial bacteriocins: monitoring enterocin expression by multiplex relative reverse transcription–PCR. Biochemical Society Transactions, 40 (6). pp. 1544-1548. ISSN 0300-5127

Lucilia sericata

Barnes, Katherine, Gennard, Dorothy and Dixon, Ron (2009) An assessment of the antibacterial activity in larval excretion/secretion from four carrion feeding species using Lucilia sericata (Meigen) as the marker species. In: BSAC Spring Meeting - Difficult to treat infections meeting; British Society of Antimicrobial Chemotherapy, 7th April 2009, Birmingham.

Lung

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Lymphocyte Subsets

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

MRSA

Lloyd, Daniel G., Schofield, Benjamin J., Goddard, Matthew R. and Taylor, Edward J. (2020) De novo resistance to arg10-teixobactin occurs slowly and is costly. Antimicrobial Agents and Chemotherapy, 65 (1). e01152-20. ISSN 0066-4804

Singh, Ishwar and Walden, Benjamin (2018) Simplified teixobactin analogues to target superbugs. Future Medicinal Chemistry, 10 (2). ISSN 1756-8919

MVB trafficking

Phelan, John P., Millson, Stefan H., Parker, Peter J., Piper, Peter W. and Cooke, Frank T. (2006) Fab1p and AP1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. Journal of Cell Science, 119 . pp. 4225-4234. ISSN 0021-9533

Macbecin

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Maghemite nanoparticles

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Malaria

Pallerla, Srinivas Reddy, Elion Assiana, Darrel Ornelle, Linh, Le Thi Kieu, Cho, Frederick Nchang, Meyer, Christian G., Fagbemi, Kaossarath Adédjokè, Adegnika, Ayola Akim, Beng, Véronique Penlap, Achidi, Eric A., Kahunu, Gauthier Mesia, Bates, Matthew, Grobusch, Martin P., Kremsner, Peter G., Ntoumi, Francine and Velavan, Thirumalaisamy P. (2021) Pharmacogenetic considerations in the treatment of co-infections with HIV/AIDS, tuberculosis and malaria in Congolese populations of Central Africa. International Journal of Infectious Diseases, 104 . pp. 207-213. ISSN 1201-9712

Tan, Kevin and Lear, Martin (2010) Scientists tag malaria superbugs. Singapore Press Holdings.

Malaria detection

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Mardivirus

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Marek Disease

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Marine ecosystems

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Marine systems

Iversen, Kriss Rokkan, Primicerio, Raul, Larsen, Aud, Egge, Jorun K., Peters, Francesc, Guadayol, Oscar, Jacobsen, Anita, Havskum, Harry and Marrase, Celia (2010) [Corrigendum to] Effects of small-scale turbulence on lower trophic levels under different nutrient conditions [vol 32, pg 197, 2010]. Journal of Plankton Research, 32 (4). p. 575. ISSN 0142-7873

Rokkan Iversen, Kriss, Primicerio, Raul, Larsen, Aud, Egge, Jorun K., Peters, Francesc, Guadayol, Oscar, Jacobsen, Anita, Havskum, Harry and Marrase, Celia (2010) Effects of small-scale turbulence on lower trophic levels under different nutrient conditions. Journal of Plankton Research, 32 (2). pp. 197-208. ISSN 0142-7873

Mass Spectrometry

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Mature Compost

Degli-Innocenti, Francesco, Goglino, Giorgia, Tosin, Maurizio, Bellia, Gaetano, Monciardini, P and Cavalletti, L (2002) Isolation and characterisation of thermophilic micro-organisms able to grow on cellulose acetate. In: Microbiology of Composting. Springer, pp. 273-286. ISBN UNSPECIFIED

Meals

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Mediterranean}

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Membrane Proteins

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Membrane proteins

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Mercury

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Metabolomics

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Methacrylates

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Microbial Sensitivity Tests

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Microbial biofilm

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Microbial diversity

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Microbial ecology

Higgins, Peter, Grace, Cooper, Lee, Soon and Goddard, Matthew (2021) Whole genome sequencing from the New Zealand Saccharomyces cerevisiae population reveals the genomic impacts of novel microbial range expansion. 3G: Genes | Genomes | Genetics, 11 (1). ISSN 2160-1836

Microbiology

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Millson, Stefan H., Truman, Andrew W., King, Victoria, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

Panaretou, Barry, Siligardi, Giuliano, Meyer, Philippe, Maloney, Alison, Sullivan, Janis K., Singh, Shradha, Millson, Stefan H., Clarke, Paul A., Naaby-Hansen, Soren, Stein, Rob, Cramer, Rainer, Mollapour, Mehdi, Workman, Paul, Piper, Peter W., Pearl, Laurence H. and Prodromou, Chrisostomos (2002) Activation of the ATPase activity of Hsp90 by the stress-regulated cochaperone Aha1. Molecular Cell, 10 (6). pp. 1307-1318. ISSN 1097-2765

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Microbiome

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Morrison-Whittle, Peter and Goddard, Matthew R. (2018) From vineyard to winery: a source map of microbial diversity driving wine fermentation. Environmental Microbiology, 20 (1). pp. 75-84. ISSN 1462-2912

Microcrystalline Cellulose

Degli-Innocenti, Francesco, Goglino, Giorgia, Tosin, Maurizio, Bellia, Gaetano, Monciardini, P and Cavalletti, L (2002) Isolation and characterisation of thermophilic micro-organisms able to grow on cellulose acetate. In: Microbiology of Composting. Springer, pp. 273-286. ISBN UNSPECIFIED

Microcystins

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Microcystis

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Microcystis aeruginosa

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Microsatellite Repeats

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Microscale patchiness

Guadayol, Òscar, Mendonca, Tania, Segura-Noguera, Mariona, Wright, Amanda J, Tassieri, Manlio and Humphries, Stuart (2021) Microrheology reveals microscale viscosity gradients in planktonic systems. Proceedings of the National Academy of Sciences, 118 (1). e2011389118. ISSN 0027-8424

Microscopy

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Minimal Medium

Degli-Innocenti, Francesco, Goglino, Giorgia, Tosin, Maurizio, Bellia, Gaetano, Monciardini, P and Cavalletti, L (2002) Isolation and characterisation of thermophilic micro-organisms able to grow on cellulose acetate. In: Microbiology of Composting. Springer, pp. 273-286. ISBN UNSPECIFIED

Models, Biological

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Models, Genetic

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Molecular Sequence Data

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Molecular structure

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Molybdate

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Mosaicism

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Mss4p

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Mucosal immunity

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Multilocus Sequence Typing

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Mutualism

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Mycelium

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Mycobacterium tuberculosis

Lee, Jae Jin, Lim, Juhyeon, Gao, Shengjia, Lawson, Christopher, Odell, Mark, Raheem, Saki, Woo, JeongIm, Kang, Sung-Ho, Jeon, Bo-Young and Eoh, Hyungjin (2018) Metabolic neutralization mitigates propionate toxicity in intracellular Mycobacterium tuberculosis. Scientific Reports, 8 (8506). pp. 1-13. ISSN 2045-2322

Mycological Typing Techniques

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Mycotoxin

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

Mycotoxin bioassay

Li, Xingmin, Millson, Stefan H., Coker, Raymond D. and Evans, Ivor H. (2006) Cloning and expression of Penicillium minioluteum dextranase in Saccharomyces cerevisiae and its exploitation as a reporter in the detection of mycotoxins. Biotechnology Letters, 28 . pp. 1955-1964. ISSN 0141-5492

N. vespilloides

Miller, Charlotte and Cotter, Sheena (2018) Resistance and tolerance: the role of nutrients on pathogen dynamics and infection outcomes in an insect host. Journal of Animal Ecology, 87 (2). pp. 500-510. ISSN 0021-8790

Near-wall

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Nectria

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Negibacteria

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Nicrophorus vespilloides

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

Nitrate concentration

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nitrate reduction

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nitrite Reductases

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Nitrite reductase genes

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nitrite reductase genes, Estuaries, messenger RNA

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Nitrogen

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Nitrogen Compounds

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nitrogen Fixation

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Nitrogen compounds

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Nitrogen removal

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

NotOAChecked

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Gillett, Alice, Waugh, David, Lawrence, Jonathan, Swainson, Mark and Dixon, Ron (2016) Laser surface modification for the prevention of biofouling by infection causing Escherichia Coli. Journal of Laser Applications, 28 (2). 022503. ISSN 1042-346X

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Morrison-Whittle, Peter and Goddard, Matthew (2015) Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities. The ISME Journal, 9 (9). pp. 2003-2011. ISSN 1751-7362

Nucleic Acid Conformation

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Nucleic Acid Hybridization

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Nutrient gradients

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Nutrient inputs

Guadayol, Oscar, Marrase, Celia, Peters, Francesc, Berdalet, Elisa, Roldan, Cristina and Sabata, Anna (2009) Responses of coastal osmotrophic planktonic communities to simulated events of turbulence and nutrient load throughout a year. Journal of Plankton Research, 31 (6). pp. 583-600. ISSN 0142-7873

Nutrients

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Nutritional supplements

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Ochrobactrum

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Ochrobactrum anthropi

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Oleispira antarctica

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Oligonucleotide Probes

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Oprf porin

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Organic carbon

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Outer membrane proteins

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Oxidation-Reduction

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

P. luminescens

Miller, Charlotte and Cotter, Sheena (2018) Resistance and tolerance: the role of nutrients on pathogen dynamics and infection outcomes in an insect host. Journal of Animal Ecology, 87 (2). pp. 500-510. ISSN 0021-8790

PDR12

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Paracoccus

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Partition systems

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Pathogens

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Ortali, Arianna, Wright, Jonathan and Onarinde, Bukola (2021) Effect of UV-C on Escherichia coli, Staphylococcus aureus, Salmonella Typhimurium and SARS-CoV-2 Virus Surrogate (MS2 bacteriophage) Inoculated onto Stainless Steel Surface. In: World Microbe Forum, 20 - 24 June 2021, Online.

Peas

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Penicillium minioluteum

Li, Xingmin, Millson, Stefan H., Coker, Raymond D. and Evans, Ivor H. (2006) Cloning and expression of Penicillium minioluteum dextranase in Saccharomyces cerevisiae and its exploitation as a reporter in the detection of mycotoxins. Biotechnology Letters, 28 . pp. 1955-1964. ISSN 0141-5492

Peptides, Cyclic

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Pesticides

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Pharmacogenetics

Pallerla, Srinivas Reddy, Elion Assiana, Darrel Ornelle, Linh, Le Thi Kieu, Cho, Frederick Nchang, Meyer, Christian G., Fagbemi, Kaossarath Adédjokè, Adegnika, Ayola Akim, Beng, Véronique Penlap, Achidi, Eric A., Kahunu, Gauthier Mesia, Bates, Matthew, Grobusch, Martin P., Kremsner, Peter G., Ntoumi, Francine and Velavan, Thirumalaisamy P. (2021) Pharmacogenetic considerations in the treatment of co-infections with HIV/AIDS, tuberculosis and malaria in Congolese populations of Central Africa. International Journal of Infectious Diseases, 104 . pp. 207-213. ISSN 1201-9712

Phosphates

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Phosphatidylinositol bisphosphate

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Phospholipids

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Photoautotrophs

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Phylogeny

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Pilot scale

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Pipe

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Pipe flow

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Pisum sativum

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Planktonic bacterivory

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Angel-Ripoll, Laia, Terrado, Ramon, Lovejoy, Connie and Pedros-Alio, Carlos (2008) Seasonal changes in planktonic bacterivory rates under the ice-covered coastal Arctic Ocean. Limnology and Oceanography, 53 (6). pp. 2427-2438. ISSN 0024-3590

Plant Diseases

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Plasmid

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Plasmids

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Plasmids, Bacteria (microorganisms)

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Plasmodium

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Plasmodium falciparum

Ch'ng, J.-H., Kotturi, S. R., Chong, A. G.-L., Lear, Martin J. and Tan, K. S.-W. (2010) A programmed cell death pathway in the malaria parasite Plasmodium falciparum has general features of mammalian apoptosis but is mediated by clan CA cysteine proteases. Cell Death and Disease, 1 (2). e26. ISSN 2041-4889

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Poecilochirus carabi

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

Polymerase Chain Reaction

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Polymorphism, Restriction Fragment Length

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Polymyxin B

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Polysaccharides

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Population

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Posibacteria

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Potable water

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Primary production

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Process activities

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Process control

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Prokaryota

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Prokaryotic

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Protein kinase

Truman, A. W., Millson, S. H., Nuttall, J. M., Mollapour, M., Prodromou, C. and Piper, P. W. (2007) In the yeast heat shock response, Hsf1 directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., King, Victoria, Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2006) Expressed in the yeast saccharomyces cerevisiae, human ERK5 Is a client of the Hsp90 chaperone that complements loss of the Slt2p (Mpk1p) cell Integrity stress-activated protein kinase. Eukaryotic Cell, 5 (11). pp. 1914-1924. ISSN 1535-9778

Protein level

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Proteins

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Proteobacteria

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Proteomics

Goncheva, Mariya I., Conceicao, Carina, Tuffs, Stephen W., Lee, Hui-Min, Quigg-Nicol, Marlynne, Bennet, Ian, Sargison, Fiona, Pickering, Amy C., Hussain, Saira, Gill, Andrew C., Dutia, Bernadette M., Digard, Paul, Fitzgerald, J. Ross and Palese, Peter (2020) Staphylococcus aureus Lipase 1 Enhances Influenza A Virus Replication. mBio, 11 (4). ISSN 2150-7511

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Protista

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Pseudoalteromonas

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Pseudomonas

Andreani, Nadia and Fasolato, Luca (2016) Pseudomonas and related genera. In: The microbiological quality of food: foodborne spoilers. Woodhead Publishing Series in Food Science, Technology and Nutrition . Elsevier, pp. 7-54. ISBN 9780081005026, 9780081005033

Pseudomonas aeruginosa

Bramston, D. M. and Dixon, Ron (2009) Analysis of textural attachment preferences of Pseudomonas aeruginosa ATCC27853 to blast furnace slag using confocal microscopy. In: 109th General Meeting, American Society for Microbiology, 17 -21 May 2009, Philadelphia, Pennsylvania.

Pseudomonas fluorescens

Andreani, Nadia, Carraro, Lisa, Martino, Maria Elena, Fondi, Marco, Fasolato, Luca, Miotto, Giovanni, Magro, Massimiliano, Vianello, Fabio and Cardazzo, Barbara (2015) A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens. International Journal of Food Microbiology, 213 . pp. 88-98. ISSN 0168-1605

Pseudomonas fluorescens group

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Pumpkin seeds

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Pyrimidines

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Quantitative PCR

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

RAPD-PCR

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

RNA

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

RNA 16S

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

RNA 16S, abundance

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

RNA 16S, ammonification

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

RNA 16S, article

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

RNA 16S, bacterium

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

RNA 16S, denitrification

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

RNA 16S, microbial community, agriculture

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

RNA 18S, arbuscular mycorrhiza

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

RNA fingerprinting

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

RNA sequence

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

RNA, Acinetobacter

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

RNA, Antisense

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

RNA, Bacterial

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

RNA, Good agricultural practice (GAP)

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

RNA, Messenger

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

RNA, Polymorphism, Soils, RNA 16S, bacterial disease

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

RNA, Ribosomal, 16S

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

RNA, Ribosomal, 18S

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

RNA, ammonification

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

RNA, amplicon

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Radicicol

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Radiolabelled

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

Recombinases

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Recombination, Genetic

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Refrigerator

James, Christian, Daramola, Bukola and James, Steve (2017) The use and performance of household refrigerators: a review. Comprehensive Reviews in Food Science and Food Safety, 16 (1). pp. 160-179. ISSN 1541-4337

Regression analysis

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Replication Origin

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Reproducibility of Results

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Republic of Congo

Pallerla, Srinivas Reddy, Elion Assiana, Darrel Ornelle, Linh, Le Thi Kieu, Cho, Frederick Nchang, Meyer, Christian G., Fagbemi, Kaossarath Adédjokè, Adegnika, Ayola Akim, Beng, Véronique Penlap, Achidi, Eric A., Kahunu, Gauthier Mesia, Bates, Matthew, Grobusch, Martin P., Kremsner, Peter G., Ntoumi, Francine and Velavan, Thirumalaisamy P. (2021) Pharmacogenetic considerations in the treatment of co-infections with HIV/AIDS, tuberculosis and malaria in Congolese populations of Central Africa. International Journal of Infectious Diseases, 104 . pp. 207-213. ISSN 1201-9712

Resistance

Eales, Marcus (2015) The visualisation of interactions between Acinetobacter baumannii and the antimicrobial peptides: colistin sulphate, bicarinalin and BP100. MRes thesis, University of Lincoln.

Respiration

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Reverse Transcriptase Polymerase Chain Reaction

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Reverse transcription

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Review

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Ribonuclease

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Ribosome

Lancaster, Lorna, Savelsbergh, Andreas, Kleanthous, Colin, Wintermeyer, Wolfgang and Rodnina, Marina (2008) Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes. Molecular Microbiology, 69 (2). pp. 390-401. ISSN 0950-382X

River Humber

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) A survey of the prevalence of Vibrio parahaemolyticus in the River Humber on the East Coast of England. In: 108th American Society of Microbiology (ASM) General Meeting, 1st - 5th June 2008, Boston, USA.

Roseobacter

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

SARS-CoV-2 Virus Surrogate

Ortali, Arianna, Wright, Jonathan and Onarinde, Bukola (2021) Effect of UV-C on Escherichia coli, Staphylococcus aureus, Salmonella Typhimurium and SARS-CoV-2 Virus Surrogate (MS2 bacteriophage) Inoculated onto Stainless Steel Surface. In: World Microbe Forum, 20 - 24 June 2021, Online.

SNAREs

Ferrari, Enrico, Maywood, Elizabeth S., Restani, Laura, Caleo, Matteo, Pirazzini, Marco, Rossetto, Ornella, Hastings, Michael H., Niranjan, Dhevahi, Schiavo, Giampietro and Davletov, Bazbek (2011) Re-assembled botulinum neurotoxin inhibits CNS Functions without systemic toxicity. Toxins, 3 (4). pp. 345-355. ISSN 2072-6651

SWD

Jones, R., Fountain, M. T., Günther, C. S., Eady, P. E. and Goddard, Matthew (2021) Separate and combined Hanseniaspora uvarum and Metschnikowia pulcherrima metabolic volatiles are attractive to Drosophila suzukii in the laboratory and field. Scientific Reports, 11 . p. 1201. ISSN 2045-2322

Saccaromyces cerevisiae

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Saccharomyces

Gayevskiy, Velimir and Goddard, Matthew R. (2016) Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests. Environmental Microbiology, 18 (4). pp. 1137-1147. ISSN 1462-2920

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Saccharomyces cerevisiae

Li, Xingmin, Millson, Stefan H., Coker, Raymond D. and Evans, Ivor H. (2006) Cloning and expression of Penicillium minioluteum dextranase in Saccharomyces cerevisiae and its exploitation as a reporter in the detection of mycotoxins. Biotechnology Letters, 28 . pp. 1955-1964. ISSN 0141-5492

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Saccharomyces cerevisiae, Saccharomyces cerevisiae

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Saccharomycetaceae

Gunther, Catrin, Knight, Sarah, Jones, Rory and Goddard, Matthew (2019) Are Drosophila preferences for yeasts stable or contextual? Ecology and Evolution, 9 (14). pp. 8075-8086. ISSN 2045-7758

Salmonela enterica

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

Salmonella

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Effect of added water and steam on the heat resistance of Salmonella enteritidis phage type 30 surrogate, Enterococcus faecium on blanched peanuts, cashews, pumpkin seeds, red skin peanuts and walnut. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Evaluation of selective and non-selective plating media for recovery of Salmonella enteritidis PT 30 (SEPT 30), Salmonella seftenberg 775W (775W) and Salmonella typhimurium DT 104 (DT 104) colonies from heat treated almonds. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

Sampling devices

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Sanitation

Anvarian, Amir, Smith, MP and Overton, TW (2019) Flow cytometry and growth‐based analysis of the effects of fruit sanitation on the physiology of Escherichia coli in orange juice. Food Science and Technology . pp. 1-12. ISSN 2048-7177

Saudi Arabia

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Scanning electron microscopy

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

School meals

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Seawater

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Sediment resuspension

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Sediments

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Sediments, Bacterial community

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Sediments, Gene sequences, Genes, DNA

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Selective and Non-selective media

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Evaluation of selective and non-selective plating media for recovery of Salmonella enteritidis PT 30 (SEPT 30), Salmonella seftenberg 775W (775W) and Salmonella typhimurium DT 104 (DT 104) colonies from heat treated almonds. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Senior High Schools

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Sequence Analysis, DNA

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Sequence Homology, Nucleic Acid

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Sequence Homology, Nucleic Acid, Eurasia

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Set theory

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Shewanella

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Shewanella sp.

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Siderophores

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Simultaneous analysis, Biofilms

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Skin

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Skin measurements

Rippon, M. G., Springett, K., Walmsley, R., Patrick, K. and Millson, S. (1998) Ultrasound assessment of skin and wound tissue: comparison with histology. Skin Research and Technology, 4 (3). pp. 147-154. ISSN 0909-752X

Slurry experiment

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Social evolution

Greig, Duncan and Goddard, Matthew (2015) Ecology: tribal warfare maintains microbial diversity. Current Biology, 25 (14). R618-R620. ISSN 0960-9822

Soil

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Soil Microbiology

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Soil Microbiology, Bacteria (microorganisms)

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Soil Pollutants

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Species Specificity

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Species Specificity, Bacteria (microorganisms)

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Sphingomonas

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Stainless steel

Ortali, Arianna, Wright, Jonathan and Onarinde, Bukola (2021) Effect of UV-C on Escherichia coli, Staphylococcus aureus, Salmonella Typhimurium and SARS-CoV-2 Virus Surrogate (MS2 bacteriophage) Inoculated onto Stainless Steel Surface. In: World Microbe Forum, 20 - 24 June 2021, Online.

Staphylococcus aureus

Goncheva, Mariya I., Conceicao, Carina, Tuffs, Stephen W., Lee, Hui-Min, Quigg-Nicol, Marlynne, Bennet, Ian, Sargison, Fiona, Pickering, Amy C., Hussain, Saira, Gill, Andrew C., Dutia, Bernadette M., Digard, Paul, Fitzgerald, J. Ross and Palese, Peter (2020) Staphylococcus aureus Lipase 1 Enhances Influenza A Virus Replication. mBio, 11 (4). ISSN 2150-7511

Lloyd, Daniel G., Schofield, Benjamin J., Goddard, Matthew R. and Taylor, Edward J. (2020) De novo resistance to arg10-teixobactin occurs slowly and is costly. Antimicrobial Agents and Chemotherapy, 65 (1). e01152-20. ISSN 0066-4804

Sti1p

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Streptococcus pneumoniae; Cefotaxime; moxifloxacin; azithromycin; Teixobactin-Arg10

Leonard, Anne, Möhlis, Kevin, Schlüter, Rabea, Taylor, Edward, Lalk, Michael and Methling, Karen (2020) Exploring metabolic adaptation of Streptococcus pneumoniae to antibiotics. The Journal of Antibiotics . pp. 1-14. ISSN 0021-8820

Streptomyces

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Stress resistance

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Stress response

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Students

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Sub-Saharan Africa

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Substrate Specificity, Acinetobacter

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Sulfolobus

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Sulfur

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Supershift

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

Supervision, Control system analysis

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Support, Non-U.S. Gov't

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Support, Non-U.S. Gov't, Bacteria (microorganisms)

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Systems Theory

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

T-Lymphocytes

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

TRAP1

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Taq polymerase, DNA Primers

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Teixobactins

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Singh, Ishwar, Malkawi, Ruba, Iyer, Abhishek, Parmar, Anish, Lloyd, Daniel, Goh, E, Taylor, Edward, Sarmad, Sarir, Madder, A and Lakshminarayanan, R (2018) Cysteines and Disulfide-Bridged Macrocyclic Mimics of Teixobactin Analogues and Their Antibacterial Activity Evaluation against Methicillin-Resistant Staphylococcus Aureus (MRSA). Pharmaceutics, 10 (4). p. 183. ISSN 1999-4923

Tellurium

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Temperate estuary

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

Temperature

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Malits, Andrea and Pedros-Alio, Carlos (2009) Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54 (1). pp. 101-112. ISSN 0948-3055

Temperature, Alcanivorax

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Terrestrial runoff

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Thailand, Bacteria (microorganisms)

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

Thalassolituus

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Thalassolituus oleivorans

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

Thermal treatment

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

Time Factors

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Time series

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Time-temperature

Ortali, Arianna and Onarinde, Bukola (2021) Growth Potential of Listeria monocytogenes on Cantaloupe (cucumis melo) pulp evaluation under a dynamic time-temperature profile. In: ASM Microbe 2021, 20 - 24 June 2021, Online.

Tolerance

Miller, Charlotte and Cotter, Sheena (2018) Resistance and tolerance: the role of nutrients on pathogen dynamics and infection outcomes in an insect host. Journal of Animal Ecology, 87 (2). pp. 500-510. ISSN 0021-8790

Trachea

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Training

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Trans-Activators

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Trans-Activators, Bacteria (microorganisms)

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Transcription

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Transcription factor

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Transcription, Estuarine sediments

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Transcription, Genetic

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

Transfer functions, Discrete event systems

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Translation

Lancaster, Lorna, Savelsbergh, Andreas, Kleanthous, Colin, Wintermeyer, Wolfgang and Rodnina, Marina (2008) Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes. Molecular Microbiology, 69 (2). pp. 390-401. ISSN 0950-382X

Transposases

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Transposon Resolvases

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Treatment-specific shifts, Biofilms, beta glucosidase

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Trees

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Triticum aestivum

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Triticum, Bacteria (microorganisms)

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Tropical Climate, Africa

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Troubleshooting

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

Tuberculosis

Dixon, R. A. (2009) Tuberculosis: molecular diagnosis of past populations. In: IBMS Biomedical Sciences Congress, 28 - 30 September 2009, Birmingham, UK.

Pallerla, Srinivas Reddy, Elion Assiana, Darrel Ornelle, Linh, Le Thi Kieu, Cho, Frederick Nchang, Meyer, Christian G., Fagbemi, Kaossarath Adédjokè, Adegnika, Ayola Akim, Beng, Véronique Penlap, Achidi, Eric A., Kahunu, Gauthier Mesia, Bates, Matthew, Grobusch, Martin P., Kremsner, Peter G., Ntoumi, Francine and Velavan, Thirumalaisamy P. (2021) Pharmacogenetic considerations in the treatment of co-infections with HIV/AIDS, tuberculosis and malaria in Congolese populations of Central Africa. International Journal of Infectious Diseases, 104 . pp. 207-213. ISSN 1201-9712

Turbulence in laboratory containers

Guadayol, Oscar, Peters, Francesc, Stiansen, Jan Erik, Marrase, Celia and Lohrmann, Atle (2009) Evaluation of oscillating grids and orbital shakers as means to generate isotropic and homogeneous small-scale turbulence in laboratory enclosures commonly used in plankton studies. Limnology and Oceanography: Methods, 7 (4). pp. 287-303. ISSN 1541-5856

Tyrosine, Bacteria (microorganisms)

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

URTI

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

UV

Ortali, Arianna, Wright, Jonathan and Onarinde, Bukola (2021) Effect of UV-C on Escherichia coli, Staphylococcus aureus, Salmonella Typhimurium and SARS-CoV-2 Virus Surrogate (MS2 bacteriophage) Inoculated onto Stainless Steel Surface. In: World Microbe Forum, 20 - 24 June 2021, Online.

Ultrasound imaging

Rippon, M. G., Springett, K., Walmsley, R., Patrick, K. and Millson, S. (1998) Ultrasound assessment of skin and wound tissue: comparison with histology. Skin Research and Technology, 4 (3). pp. 147-154. ISSN 0909-752X

United Kingdom

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

United Kingdom, Bacterial Proteins

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

United Kingdom, Biodegradation, Environmental

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

United States

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

United kingdom, Ammonium compounds

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Upogebia deltaura

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

VRE

Singh, Ishwar and Walden, Benjamin (2018) Simplified teixobactin analogues to target superbugs. Future Medicinal Chemistry, 10 (2). ISSN 1756-8919

Variation (Genetics)

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

Variation (Genetics), Bacteria (microorganisms)

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Variation (Genetics), United Kingdom, Bacteria (microorganisms)

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Variovorax

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

Verapamil

Ch'ng, J.-H., Kotturi, S. R., Chong, A. G.-L., Lear, Martin J. and Tan, K. S.-W. (2010) A programmed cell death pathway in the malaria parasite Plasmodium falciparum has general features of mammalian apoptosis but is mediated by clan CA cysteine proteases. Cell Death and Disease, 1 (2). e26. ISSN 2041-4889

Vesicle leakage

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Vibrio

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Vibrio parahaemolyticus

Daramola, Bukola, Dixon, Ron and Williams, D. R. (2008) Antibiotic susceptibility of Vibrio parahaemolyticus: a surveillance study. In: American Society of Microbiology conference on antimicrobial resistance in zoonotic bacteria and foodborne pathogens, 15th - 18th June 2008, Copenhagen, Denmark.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Society for General Microbiology Meeting, 30th March - 2nd April 2009, Harrogate, United Kingdom.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Infection 2009 - Federation of Infection Societies, 11th - 13th November 2009, Birmingham, UK.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Environmental distribution and molecular analysis of Vibrio parahaemolyticus isolated from the East Coast region of England. In: Infectious Diseases Society of America Meeting, 29th October - 1st November 2009, Philadelphia, USA.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) Improved detection of environmental Vibrio parahaemolyticus through the use of chromogenic media. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) A survey of the prevalence of Vibrio parahaemolyticus in the River Humber on the East Coast of England. In: 108th American Society of Microbiology (ASM) General Meeting, 1st - 5th June 2008, Boston, USA.

Daramola, Bukola A., Williams, Ross and Dixon, Ron A. (2009) In vitro antibiotic susceptibility of Vibrio parahaemolyticus from environmental sources in Northern England. International Journal of Antimicrobial Agents, 34 (5). pp. 499-500. ISSN 0924-8579

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

Vibrio sp.

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Vibrio, Alphaproteobacteria

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Viola (angiosperm), Anti-Bacterial Agents

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Viral Load

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Virulence, Fungi

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Virus Replication, Gallid herpesvirus 2

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Viscosity, Colpidium striatum

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Wastewater treatment, Nitrates, ammonia

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Water Microbiology

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Water Microbiology, Bacteria (microorganisms)

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Water Microbiology, Colne Estuary

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Water Pollutants, Chemical, Bacteria (microorganisms)

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Water Pollution, Chemical

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Water Supply, Bacteria (microorganisms)

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Water activity

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Water distribution systems

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Water supply, Biofilters, 4',6 diamidino 2 phenylindole

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Waves

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Weak acid

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Western Europe, Bacillariophyta

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Western Europe, Bacteria (microorganisms)

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Western Europe, Deltaproteobacteria

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

World, Bacteria (microorganisms)

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Wound healing

Rippon, M. G., Springett, K., Walmsley, R., Patrick, K. and Millson, S. (1998) Ultrasound assessment of skin and wound tissue: comparison with histology. Skin Research and Technology, 4 (3). pp. 147-154. ISSN 0909-752X

Wounds

Barnes, K. M., Gennard, Dorothy and Dixon, Ron (2010) The antibacterial potency of the medicinal maggot Lucilia sericata (Meigen): variation in laboratory evaluation. Journal of Microbiological Methods, 82 (3). pp. 234-237. ISSN 0167-7012

Y-chromosonal STR

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2010) Haplotypes for 17 Y-chromosomal STR loci in a population from eastern Libya (Benghazi region). In: 7th International Y Chromosome User Workshop and 4th International EMPOP, 22 - 24 April 2010, Berlin, Germany.

Yeast

Gayevskiy, Velimir and Goddard, Matthew R. (2016) Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests. Environmental Microbiology, 18 (4). pp. 1137-1147. ISSN 1462-2920

Higgins, Peter, Grace, Cooper, Lee, Soon and Goddard, Matthew (2021) Whole genome sequencing from the New Zealand Saccharomyces cerevisiae population reveals the genomic impacts of novel microbial range expansion. 3G: Genes | Genomes | Genetics, 11 (1). ISSN 2160-1836

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

Millson, Stefan H. and Evans, Ivor Howell (2007) Multiple dextranases from the yeast Lipomyces starkeyi. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 92 . pp. 399-404. ISSN 0003-6072

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Truman, A. W., Millson, S. H., Nuttall, J. M., Mollapour, M., Prodromou, C. and Piper, P. W. (2007) In the yeast heat shock response, Hsf1 directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., King, Victoria, Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2006) Expressed in the yeast saccharomyces cerevisiae, human ERK5 Is a client of the Hsp90 chaperone that complements loss of the Slt2p (Mpk1p) cell Integrity stress-activated protein kinase. Eukaryotic Cell, 5 (11). pp. 1914-1924. ISSN 1535-9778

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi, Prodromou, Chrisostomos and Piper, Peter W. (2007) In the yeast heat shock response, Hsf1-directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Zea mays

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

ac

Williams, D. Ross, Thomas, Angela E., Hepburn, Neil C., Watts, Toni and Dixon, Ron A. (2004) Changes in skin microbiota of patients associated with treatment by Isotretinoin. In: 43rd Interscience Conference on Antimicrobial Agents and Chemotherapy, November 2004, Washington, DC.

accessory genome

Andreani, Nadia, Hesse, Elze and Vos, Michiel (2017) Prokaryote genome fluidity is dependent on effective population size. The ISME Journal (11). pp. 1719-1721. ISSN 1751-7362

acclimatization

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

acne

Dixon, Ron A., Thomas, Angela E., Watts, Toni, Hepburn, Neil C. and Williams, D. Ross (2004) Treatment of acne patients with Isotretinoin: related changes in skin microbiota. In: 6th European Congress of Chemotherapy and Infection, November, 2004, Paris, France.

Thomas, Angela E., Williams, D. Ross, Watts, Toni, Hepburn, Neil C. and Dixon, Ron A. (2008) Investigation of the changing colonisation of skin bacteria during isotretinoin treatment for Acne vulgaris. In: Meeting - Society for General Microbiology, 31 March to 01 April 2008, Edinburgh.

Thomas, Angela E., Williams, D. Ross, Hepburn, Neil C., Watts, Toni and Dixon, Ron A. (2005) Staphylococcal microbiota from the skin of patients: changes associated with treatment by Isotretinoin. In: 15th European Congress of Clinical Microbiology and Infectious Diseases, 01 April to 15 April, 2005, Copenhagen.

acne vulgaris

Ryan-Kewley, Angela E. (2011) Microbial ecology of Propionibacterium acnes in patients undergoing treatment with isotretinoin. PhD thesis, University of Lincoln.

Thomas, A. E., Williams, D. R., Watts, T., Hepburn, N. C . and Dixon, Ron (2008) Investigation into the changing colonisation of skin bacteria during isotretinoin treatment for acne vulgaris. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

actin

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

active site

Walker, Daniel, Lancaster, Lorna, James, Richard and Kleanthous, Colin (2004) Identification of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3. Protein Science, 13 (6). pp. 1603-1611. ISSN 0961-8368

adaptation

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

adherance

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

agricultural management

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

agricultural procedures

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

airway epithelial cell

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

alpha interferon

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

alternative model

Kay, Sammy, Edwards, Joseph, Brown, Joseph and Dixon, Ron (2019) Galleria mellonella Infection Model Identifies Both High and Low Lethality of Clostridium perfringens Toxigenic Strains and Their Response to Antimicrobials. Frontiers in Microbiology, 10 (1281). ISSN 1664-302X

amber

Cotton, G. and Dixon, R. A. (2011) Recovery of 'ancient' microbes from amber: an experimental approach. In: 7th National FORREST Conference, 29 - 30 June 2011, Nottingham, UK.

amino acids

Anvarian, Amir, Smith, MP and Overton, TW (2018) Use of flow cytometry and total viable count to determine the effects of orange juice composition on the physiology of Escherichia coli. Food Science and Nutrition . ISSN 2048-7177

aminopeptidase

Sala, Maria Montserrat, Arin, Laura, Balague, Vanessa, Felipe, Jordi, Guadayol, Oscar and Vaque, Dolors (2005) Functional diversity of bacterioplankton assemblages in western Antarctic seawaters during late spring. Marine Ecology Progress Series, 292 . pp. 13-21. ISSN 0171-8630

ammonium

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

amplicon sequencing

Harrison, XA, McDevitt, A, Dunn, Jenny, Griffiths, S, Benvenuto, C, Birtles, RJ, Boubli, JP, Bown, K, Bridson, C, Brooks, DR, Browett, SS, Carden, R, Clever, F, Coscia, I, Edwards, KL, Ferry, N, Goodhead, IB, Highlands, A, Hopper, J, Jackson, J, Jehle, R, Kaizer, M, King, T, Lea, J, Lenka, JL, McCubbin, A, McKenzie, J, Moraes, B, O'Meara, D, Pescod, P, Preziosi, RF, Rowntree, JK, Shultz, S, Silk, M, Stockdale, JE, Symondson, WOC, de lan Pena, M, Walker, S, Wood, M, Meade, E and Antwis, RE (2021) Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288 (1957). p. 20210552. ISSN 0962-8452

amyloid beta protein1-40

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

amyloid beta protein1-42

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

amyloid forming host defence peptide

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

ancient DNA

Dixon, Ron, Dawson, Lucy and Taylor, Delia (2008) The experimental degradation of archaeological human bone by anaerobic bacteria and the implications for recovery of ancient DNA. In: The 9th International Conference on Ancient DNA and Associated Biomolecules, 19-22 October 2008, Pompeii, Italy.

animal experiment

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

animal model

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

animal tissue

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

antibacterial

Dixon, Ron (2008) Role of the cell envelope in the antibacterial activities of cyclic polypeptides against Eschericia coli. In: 2nd World Conference on Magic Bullets, 3rd - 5th October 2008, Nuremberg, Germany.

Parmar, Anish, Iyer, Abhishek, Prior, Stephen H., Lloyd, Daniel G., Goh, Eunice, Vincent, Charlotte, Palmai-Pallag, Timea, Bachrati, Csanad, Breukink, Eefjan, Madder, Annemieke, Lakshminarayanan, Rajamani, Taylor, Edward J. and Singh, Ishwar (2017) Teixobactin analogues reveal enduracididine to be non-essential for highly potent antibacterial activity and lipid II binding. Chemical Science, 8 (12). pp. 8183-8192. ISSN 2041-6520

antibacterial activity

Barnes, K. M., Gennard, D. E. and Dixon, R. A. (2009) Investigation into the antibacterial activity in excretion/secretions (ES) from four insects associated with a corpse. In: Royal Entomological Society Meeting, insect infection and immunity, 15 - 17 July 2009, Sheffield, UK.

Barnes, Katherine, Gennard, Dorothy and Dixon, Ron (2008) Differences in the antibacterial activity of Lucilia sericata (M) larval excretion/secretion compared to Calliphora vicina (R-D), Tenebrio molitor (l) and Dermestes maculatus (D). In: 108th American Society of Microbiology (ASM) General Meeting, 1st - 5th June 2008, Boston, USA.

Barnes, Katherine, Gennard, Dorothy and Dixon, Ron (2009) An assessment of the antibacterial activity in larval excretion/secretion from four carrion feeding species using Lucilia sericata (Meigen) as the marker species. In: BSAC Spring Meeting - Difficult to treat infections meeting; British Society of Antimicrobial Chemotherapy, 7th April 2009, Birmingham.

Dixon, R. A. and Baron, Mark (2011) A novel silver colloid: assessment of antibacterial activity. In: 27th International Congress of Chemotherapy, 07 - 10 May 2011, Milan, Italy.

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

antibacterial potency

Barnes, K. M., Gennard, Dorothy and Dixon, Ron (2010) The antibacterial potency of the medicinal maggot Lucilia sericata (Meigen): variation in laboratory evaluation. Journal of Microbiological Methods, 82 (3). pp. 234-237. ISSN 0167-7012

antibiotic resistance

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Lloyd, Daniel G., Schofield, Benjamin J., Goddard, Matthew R. and Taylor, Edward J. (2020) De novo resistance to arg10-teixobactin occurs slowly and is costly. Antimicrobial Agents and Chemotherapy, 65 (1). e01152-20. ISSN 0066-4804

antibiotic susceptibility

Daramola, Bukola, Dixon, Ron and Williams, D. R. (2008) Antibiotic susceptibility of Vibrio parahaemolyticus: a surveillance study. In: American Society of Microbiology conference on antimicrobial resistance in zoonotic bacteria and foodborne pathogens, 15th - 18th June 2008, Copenhagen, Denmark.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Society for General Microbiology Meeting, 30th March - 2nd April 2009, Harrogate, United Kingdom.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Infection 2009 - Federation of Infection Societies, 11th - 13th November 2009, Birmingham, UK.

antibiotics

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Singh, Ishwar, Malkawi, Ruba, Iyer, Abhishek, Parmar, Anish, Lloyd, Daniel, Goh, E, Taylor, Edward, Sarmad, Sarir, Madder, A and Lakshminarayanan, R (2018) Cysteines and Disulfide-Bridged Macrocyclic Mimics of Teixobactin Analogues and Their Antibacterial Activity Evaluation against Methicillin-Resistant Staphylococcus Aureus (MRSA). Pharmaceutics, 10 (4). p. 183. ISSN 1999-4923

antiinfective agent

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

antimicrobial

Parmar, Anish, Iyer, Abhishek, Prior, Stephen H., Lloyd, Daniel G., Goh, Eunice, Vincent, Charlotte, Palmai-Pallag, Timea, Bachrati, Csanad, Breukink, Eefjan, Madder, Annemieke, Lakshminarayanan, Rajamani, Taylor, Edward J. and Singh, Ishwar (2017) Teixobactin analogues reveal enduracididine to be non-essential for highly potent antibacterial activity and lipid II binding. Chemical Science, 8 (12). pp. 8183-8192. ISSN 2041-6520

antimicrobial resistance

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Williams, Nicola, Onarinde, Bukola, UNSPECIFIED and UNSPECIFIED (2021) Assessing the impact of heat treatment of food on antimicrobial resistance genes and their potential uptake by other bacteria - A critical review. Antibiotics, 10 (12). p. 1440. ISSN 2079-6382

antimicrobial resistance gene

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Williams, Nicola, Onarinde, Bukola, UNSPECIFIED and UNSPECIFIED (2021) Assessing the impact of heat treatment of food on antimicrobial resistance genes and their potential uptake by other bacteria - A critical review. Antibiotics, 10 (12). p. 1440. ISSN 2079-6382

antimicrobials

Singh, Ishwar, Malkawi, Ruba, Iyer, Abhishek, Parmar, Anish, Lloyd, Daniel, Goh, E, Taylor, Edward, Sarmad, Sarir, Madder, A and Lakshminarayanan, R (2018) Cysteines and Disulfide-Bridged Macrocyclic Mimics of Teixobactin Analogues and Their Antibacterial Activity Evaluation against Methicillin-Resistant Staphylococcus Aureus (MRSA). Pharmaceutics, 10 (4). p. 183. ISSN 1999-4923

arbuscular mycorrhiza

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

aromatic hydrocarbon

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

article

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1995) Sequence conservation between regulatory mercury resistance genes in bacteria from mercury polluted and pristine environments. Systematic and Applied Microbiology, 18 (1). pp. 1-6. ISSN 0723-2020

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

asthma

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

autosomal STR

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2011) Genetic data provided by 15 autosomal STR loci in the Libyan population living in Benghazi. In: 7th National FORREST Conference, 29 - 30 June 2011, Nottingham, UK.

autotrophy

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

azoxystrobin

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

bacteria

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

Harrison, XA, McDevitt, A, Dunn, Jenny, Griffiths, S, Benvenuto, C, Birtles, RJ, Boubli, JP, Bown, K, Bridson, C, Brooks, DR, Browett, SS, Carden, R, Clever, F, Coscia, I, Edwards, KL, Ferry, N, Goodhead, IB, Highlands, A, Hopper, J, Jackson, J, Jehle, R, Kaizer, M, King, T, Lea, J, Lenka, JL, McCubbin, A, McKenzie, J, Moraes, B, O'Meara, D, Pescod, P, Preziosi, RF, Rowntree, JK, Shultz, S, Silk, M, Stockdale, JE, Symondson, WOC, de lan Pena, M, Walker, S, Wood, M, Meade, E and Antwis, RE (2021) Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288 (1957). p. 20210552. ISSN 0962-8452

bacteria in experimental degradation

Taylor, D. and Dixon, Ron (2010) Destruction of archaeological bone: the role of specific bacteria in experimental degradation of 700 year old human bone. Journal of Nordic Archaeological Sciences .

bacterial DNA

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

bacterial activity

Sala, Maria Montserrat, Arin, Laura, Balague, Vanessa, Felipe, Jordi, Guadayol, Oscar and Vaque, Dolors (2005) Functional diversity of bacterioplankton assemblages in western Antarctic seawaters during late spring. Marine Ecology Progress Series, 292 . pp. 13-21. ISSN 0171-8630

bacterial community

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

bacterial count

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

bacterial flora

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

bacterial gene

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

bacterial genetics

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

bacterial growth

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

bacterial membrane

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

bacterial membranes

Dixon, Ron and Sahalan, Ahmad Z. (2008) Role of the cell envelope in the antibacterial activities of polymyxin B and polymyxin B nonapeptide against Escherichia coli. International Journal of Antimicrobial Agents, 31 (3). pp. 224-227. ISSN 0924-8579

bacterial metabolism

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

bacterial outer membrane

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

bacterial protein

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

bacterial shape

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

bacteriophage

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Williams, Nicola, Onarinde, Bukola, UNSPECIFIED and UNSPECIFIED (2021) Assessing the impact of heat treatment of food on antimicrobial resistance genes and their potential uptake by other bacteria - A critical review. Antibiotics, 10 (12). p. 1440. ISSN 2079-6382

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

bacterioplankton abundance

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

bacterium

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

bacterium colony

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

bacterium isolate

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

bacterium isolation

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

benthic environment

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

benthos

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

benzoquinone ans amycins radicicol

Piper, Peter and Millson, Stefan (2012) Spotlight on the microbes that produce heat shock protein 90-targeting antibiotics. Open Biology, 2 (DEC). ISSN 2046-2441

beta interferon

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

binding affinity

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

bioassays

Loh, Cheryl C. Y., Suwanarusk, Rossarin, Lee, Yan Quan, Chan, Kitti W. K., Choy, Kit-Ying, Rénia, Laurent, Russell, Bruce, Lear, Martin J., Nosten, François H., Tan, Kevin S. W., Chow, Larry M. C. and Snounou, Georges (2014) Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay. PLoS ONE, 9 (10). e110800. ISSN 1932-6203

bioavailability

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

biodegradation

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

biodiversity

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

biofilm

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

biofilms; denaturing gradient gel electrophoresis;drinking water; enumeration; water age; water quality

Sekar, R., Deines, P., Machell, J., Osborn, M. A., Biggs, C. A. and Boxall, J. B. (2012) Bacterial water quality and network hydraulic characteristics: a field study of a small, looped water distribution system using culture-independent molecular methods. Journal of Applied Microbiology, 112 (6). pp. 1220-1234. ISSN 1364-5072

biolog

Sala, Maria Montserrat, Arin, Laura, Balague, Vanessa, Felipe, Jordi, Guadayol, Oscar and Vaque, Dolors (2005) Functional diversity of bacterioplankton assemblages in western Antarctic seawaters during late spring. Marine Ecology Progress Series, 292 . pp. 13-21. ISSN 0171-8630

biological activity

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

biological model

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

biomass

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Guadayol, Oscar, Marrase, Celia, Peters, Francesc, Berdalet, Elisa, Roldan, Cristina and Sabata, Anna (2009) Responses of coastal osmotrophic planktonic communities to simulated events of turbulence and nutrient load throughout a year. Journal of Plankton Research, 31 (6). pp. 583-600. ISSN 0142-7873

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

Uthandi, Sivakumar, Kaliyaperumal, Ashokkumar, Srinivasan, Naganandhini, Thangavelu, Kiruthika, Muniraj, Iniya Kumar, Zhan, Xinmin, Gathergood, Nicholas and Gupta, Vijai Kumar (2021) Microbial biodiesel production from lignocellulosic biomass: New insights and future challenges. Critical Reviews in Environmental Science and Technology . pp. 1-30. ISSN 1064-3389

bioprocessing

Molina, Gustavo, Gupta, Vijai, Singh, Brahma and Gathergood, Nicholas, eds. (2020) Bioprocessing for Biomolecules Production. Wiley. ISBN 9781119434320

bioremediation

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

bioturbation

Laverock, Bonnie, Gilbert, Jack A., Tait, Karen, Osborn, A. Mark and Widdicombe, Steve (2011) Bioturbation: impact on the marine nitrogen cycle. Biochemical Society Transactions, 39 (1). pp. 315-320. ISSN 0300-5127

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

bladder biopsies

Dixon, Ron and Agarwal, M. (2010) Detection of Escherichia coli DNA from interstitial cystitis bladder biopsies provides little evidence of a causal microbe. The Internet Journal of Urology, 7 (1). ISSN 1528-8390

bmjconvert

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Gillett, Alice, Waugh, David, Lawrence, Jonathan, Swainson, Mark and Dixon, Ron (2016) Laser surface modification for the prevention of biofouling by infection causing Escherichia Coli. Journal of Laser Applications, 28 (2). 022503. ISSN 1042-346X

bmjdoi

Hart, M. C., Elliott, G. N., Osborn, A. Mark, Ritchie, D. A. and Strike, P. (1998) Erratum: Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil (FEMS Microbiol. Ecol. 27 (1998) (73-84] PII: S0168649698000580). FEMS Microbiology Ecology, 27 (4). p. 395. ISSN 0168-6496

bmjgoldcheck

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

bmjtype

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

body size

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

body temperature

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

botulinum neurotoxin

Ferrari, Enrico, Maywood, Elizabeth S., Restani, Laura, Caleo, Matteo, Pirazzini, Marco, Rossetto, Ornella, Hastings, Michael H., Niranjan, Dhevahi, Schiavo, Giampietro and Davletov, Bazbek (2011) Re-assembled botulinum neurotoxin inhibits CNS Functions without systemic toxicity. Toxins, 3 (4). pp. 345-355. ISSN 2072-6651

burrow

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

cancer

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

carbohydrate

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

carbohydrate derivative

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

carbohydrate metabolism

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

carbon

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

carbon cycle

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

carbon isotope

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

carboxy terminal sequence

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1995) Sequence conservation between regulatory mercury resistance genes in bacteria from mercury polluted and pristine environments. Systematic and Applied Microbiology, 18 (1). pp. 1-6. ISSN 0723-2020

catalysis

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

causal microbe

Dixon, Ron and Agarwal, M. (2010) Detection of Escherichia coli DNA from interstitial cystitis bladder biopsies provides little evidence of a causal microbe. The Internet Journal of Urology, 7 (1). ISSN 1528-8390

cell death

Ch'ng, Jun-Hong, Mok, Sachel, Bozdech, Zbynek, Lear, Martin James, Boudhar, Aicha, Russell, Bruce, Nosten, Francois and Tan, Kevin Shyong-Wei (2013) A whole cell pathway screen reveals seven novel chemosensitizers to combat chloroquine resistant malaria. Scientific Reports, 3 (1734). ISSN 2045-2322

cell envelope

Dixon, Ron (2008) Role of the cell envelope in the antibacterial activities of cyclic polypeptides against Eschericia coli. In: 2nd World Conference on Magic Bullets, 3rd - 5th October 2008, Nuremberg, Germany.

cell level

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

cell membrane permeability

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

cell permeabilization

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

cellular DNA conten

Berdalet, Elisa, Peters, Francesc, Koumandou, V. Lila, Roldan, Cristina, Guadayol, Oscar and Estrada, Marta (2007) Species-specific physiological response of dinoflagellates to quantified small-scale turbulence. Journal of Phycology, 43 (5). pp. 965-977. ISSN 0022-3646

cellular organisms

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

chemical communication

Gunther, Catrin, Knight, Sarah, Jones, Rory and Goddard, Matthew (2019) Are Drosophila preferences for yeasts stable or contextual? Ecology and Evolution, 9 (14). pp. 8075-8086. ISSN 2045-7758

chemotaxis

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

chicken

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

chilled storage

James, Christian, Daramola, Bukola and James, Steve (2017) The use and performance of household refrigerators: a review. Comprehensive Reviews in Food Science and Food Safety, 16 (1). pp. 160-179. ISSN 1541-4337

chlorophyll a

Guadayol, Oscar, Marrase, Celia, Peters, Francesc, Berdalet, Elisa, Roldan, Cristina and Sabata, Anna (2009) Responses of coastal osmotrophic planktonic communities to simulated events of turbulence and nutrient load throughout a year. Journal of Plankton Research, 31 (6). pp. 583-600. ISSN 0142-7873

chloroquine

Loh, Cheryl C. Y., Suwanarusk, Rossarin, Lee, Yan Quan, Chan, Kitti W. K., Choy, Kit-Ying, Rénia, Laurent, Russell, Bruce, Lear, Martin J., Nosten, François H., Tan, Kevin S. W., Chow, Larry M. C. and Snounou, Georges (2014) Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay. PLoS ONE, 9 (10). e110800. ISSN 1932-6203

chromogenic media

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) Improved detection of environmental Vibrio parahaemolyticus through the use of chromogenic media. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

chromosome

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

ciliate

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

classification

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

clinical isolates

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Environmental distribution and molecular analysis of Vibrio parahaemolyticus isolated from the East Coast region of England. In: Infectious Diseases Society of America Meeting, 29th October - 1st November 2009, Philadelphia, USA.

cluster analysis

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

co-occurrence

Harrison, XA, McDevitt, A, Dunn, Jenny, Griffiths, S, Benvenuto, C, Birtles, RJ, Boubli, JP, Bown, K, Bridson, C, Brooks, DR, Browett, SS, Carden, R, Clever, F, Coscia, I, Edwards, KL, Ferry, N, Goodhead, IB, Highlands, A, Hopper, J, Jackson, J, Jehle, R, Kaizer, M, King, T, Lea, J, Lenka, JL, McCubbin, A, McKenzie, J, Moraes, B, O'Meara, D, Pescod, P, Preziosi, RF, Rowntree, JK, Shultz, S, Silk, M, Stockdale, JE, Symondson, WOC, de lan Pena, M, Walker, S, Wood, M, Meade, E and Antwis, RE (2021) Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288 (1957). p. 20210552. ISSN 0962-8452

coastal sediment

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

colicin E3

Walker, Daniel, Lancaster, Lorna, James, Richard and Kleanthous, Colin (2004) Identification of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3. Protein Science, 13 (6). pp. 1603-1611. ISSN 0961-8368

colonisation

Thomas, A. E., Williams, D. R., Watts, T., Hepburn, N. C . and Dixon, Ron (2008) Investigation into the changing colonisation of skin bacteria during isotretinoin treatment for acne vulgaris. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

commercialisation

Loh, Cheryl C. Y., Suwanarusk, Rossarin, Lee, Yan Quan, Chan, Kitti W. K., Choy, Kit-Ying, Rénia, Laurent, Russell, Bruce, Lear, Martin J., Nosten, François H., Tan, Kevin S. W., Chow, Larry M. C. and Snounou, Georges (2014) Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay. PLoS ONE, 9 (10). e110800. ISSN 1932-6203

community composition

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

community structure

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

comparative study

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

competitive interactions

Barnes, K. M., Dixon, Ron and Gennard, Dorothy (2009) A model of competitive interactions between L.sericata and pathogenic bacteria found on a corpse. In: European Association of Forensic Entomology, 9th - 12th June 2009, Uppsala, Sweden.

complementary DNA

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

concentration (composition)

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

concentration (parameters)

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

concentration response

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

confocal microscopy

Bramston, D. M. and Dixon, Ron (2009) Analysis of textural attachment preferences of Pseudomonas aeruginosa ATCC27853 to blast furnace slag using confocal microscopy. In: 109th General Meeting, American Society for Microbiology, 17 -21 May 2009, Philadelphia, Pennsylvania.

conjugation

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

consensus sequence

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

controlled study

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

correlation

El baidouri, Fouad, Venditti, Chris and Humphries, Stuart (2017) Independent evolution of shape and motility allows evolutionary flexibility in Firmicutes bacteria. Nature Ecology & Evolution, 1 (1). 0009. ISSN 2397-334X

crustacean

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

crystal violet

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

cyanoginosin

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

cyclic polypeptides

Dixon, Ron (2008) Role of the cell envelope in the antibacterial activities of cyclic polypeptides against Eschericia coli. In: 2nd World Conference on Magic Bullets, 3rd - 5th October 2008, Nuremberg, Germany.

cyclopeptide

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

cyclotide

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

cycloviolacin O2

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

cytology

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

dander

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

darkness

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

de novo resistance

Lloyd, Daniel G., Schofield, Benjamin J., Goddard, Matthew R. and Taylor, Edward J. (2020) De novo resistance to arg10-teixobactin occurs slowly and is costly. Antimicrobial Agents and Chemotherapy, 65 (1). e01152-20. ISSN 0066-4804

degradation

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

degradation of 700 year old human bone

Taylor, D. and Dixon, Ron (2010) Destruction of archaeological bone: the role of specific bacteria in experimental degradation of 700 year old human bone. Journal of Nordic Archaeological Sciences .

denaturing gradient gel electrophoresis

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

denitrification

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

destruction of archaeological bone

Taylor, D. and Dixon, Ron (2010) Destruction of archaeological bone: the role of specific bacteria in experimental degradation of 700 year old human bone. Journal of Nordic Archaeological Sciences .

detection method

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

diatom

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

diet

Harrison, XA, McDevitt, A, Dunn, Jenny, Griffiths, S, Benvenuto, C, Birtles, RJ, Boubli, JP, Bown, K, Bridson, C, Brooks, DR, Browett, SS, Carden, R, Clever, F, Coscia, I, Edwards, KL, Ferry, N, Goodhead, IB, Highlands, A, Hopper, J, Jackson, J, Jehle, R, Kaizer, M, King, T, Lea, J, Lenka, JL, McCubbin, A, McKenzie, J, Moraes, B, O'Meara, D, Pescod, P, Preziosi, RF, Rowntree, JK, Shultz, S, Silk, M, Stockdale, JE, Symondson, WOC, de lan Pena, M, Walker, S, Wood, M, Meade, E and Antwis, RE (2021) Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288 (1957). p. 20210552. ISSN 0962-8452

dinoflagellates

Berdalet, Elisa, Peters, Francesc, Koumandou, V. Lila, Roldan, Cristina, Guadayol, Oscar and Estrada, Marta (2007) Species-specific physiological response of dinoflagellates to quantified small-scale turbulence. Journal of Phycology, 43 (5). pp. 965-977. ISSN 0022-3646

direction persistence

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

disease predisposition

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444.