Lincoln Repository

Items where Subject is "C500 Microbiology"

JACS Subject (217)
- C Biological Sciences (217)
  - C500 Microbiology (217)

Group by: Creators | Keywords | Item Type

Number of items at this level: 1977.

16S rRNA gene

Dong, Liang F., Smith, Cindy J., Papaspyrou, Sokratis, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2009) Changes in benthic denitrification, nitrate ammonification, and anammox process rates and nitrate and nitrite reductase gene abundances along an estuarine nutrient gradient (the Colne estuary, United Kingdom). Applied and Environmental Microbiology, 75 (10). pp. 3171-3179. ISSN 0099-2240

16S sequencing

Anvarian, Amir H. P., Cao, Yu, Srikumar, Shabarinath, Fanning, Séamus and Jordan, Kieran (2016) Flow cytometric and 16S sequencing methodologies for monitoring the physiological status of the microbiome in powdered infant formula production. Frontiers in Microbiology, 7 (968). ISSN 1664-302X

?-amylase

Li, Xingmin, Millson, Stefan, Coker, Raymond and Evans, Ivor (2009) A sensitive bioassay for the mycotoxin aflatoxin B 1, which also responds to the mycotoxins aflatoxin G 1 and T-2 toxin, using engineered baker's yeast. Journal of Microbiological Methods, 77 (9). pp. 285-291. ISSN 0167-7012

AMR

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Willaims, Nicola and Onarinde, Bukola (2021) Assessing the impact of heat treatment on antimicrobial resistance genes and their potential uptake by other ‘live’ bacteria. Project Report. Food Standards Agency (FSA).

ANAMMOX

AP-1

Phelan, John P., Millson, Stefan H., Parker, Peter J., Piper, Peter W. and Cooke, Frank T. (2006) Fab1p and AP1 are required for trafficking of endogenously ubiquitylated cargoes to the vacuole lumen in S. cerevisiae. Journal of Cell Science, 119 . pp. 4225-4234. ISSN 0021-9533

ARGs

ATP binding cassette transporters

Piper, Peter W., Millson, Stefan H., Mollapour, Mehdi, Panaretou, Barry, Siligardi, Giuliano, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Sensitivity to Hsp90-targeting drugs can arise with mutation to the Hsp90 chaperone, cochaperones and plasma membrane ATP binding cassette transporters of yeast. European Journal of Biochemistry, 270 (23). pp. 4689-4695. ISSN 0014-2956

Abattoir

Warmate, Dein and Onarinde, Bukola (2023) Food safety incidents in the red meat industry: A review of foodborne disease outbreaks linked to the consumption of red meat and its products, 1991 to 2021. International Journal of Food Microbiology, 398 . ISSN 0168-1605

Abiotic conditions

Deines, Peter, Sekar, Raju, Husband, P. Stewart, Boxall, Joby B., Osborn, A. Mark and Biggs, Catherine A. (2010) A new coupon design for simultaneous analysis of in situ microbial biofilm formation and community structure in drinking water distribution systems. Applied Microbiology and Biotechnology, 87 (2). pp. 749-756. ISSN 0175-7598

Accident prevention

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Acinetobacter baumannii

Miller, Clare, Ferrari, Enrico, Lancaster, Lorna, Sanderson, Peter, Goddard, Alan and Eales, Marcus (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Acne

Ryan-Kewley, Angela E. (2011) Microbial ecology of Propionibacterium acnes in patients undergoing treatment with isotretinoin. PhD thesis, University of Lincoln.

Acne vulagaris

Thomas, Angela E., Williams, D. Ross, Hepburn, Neil C., Watts, Toni and Dixon, Ron A. (2005) Staphylococcal microbiota from the skin of patients: changes associated with treatment by Isotretinoin. In: 15th European Congress of Clinical Microbiology and Infectious Diseases, 01 April to 15 April, 2005, Copenhagen.

Actinobacteria

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Carbon and nitrogen biogeochemical cycling potentials of supraglacial cryoconite communities. Polar Biology, 35 (9). pp. 1375-1393. ISSN 0722-4060

Adaptation, Physiological

Beveridge, Oliver S., Petchey, Owen L. and Humphries, Stuart (2010) Mechanisms of temperature-dependent swimming: the importance of physics, physiology and body size in determining protist swimming speed. Journal of Experimental Biology, 213 (24). pp. 4223-4231. ISSN 0022-0949

Aflatoxin B1

Agriculture

Girvan, Martina S., Bullimore, Juliet, Ball, Andrew S., Pretty, Jules N. and Osborn, A. Mark (2004) Responses of active bacterial and fungal communities in soils under winter wheat to different fertilizer and pesticide regimens. Applied and Environmental Microbiology, 70 (5). pp. 2692-2701. ISSN 0099-2240

Alexandrium spp. and turbulence

Bolli, L., Llaveria, G., Garces, E., Guadayol, Oscar, van Lenning, K., Peters, F. and Berdalet, E. (2007) Modulation of ecdysal cyst and toxin dynamics of two Alexandrium (Dinophyceae) species under small-scale turbulence. Biogeosciences, 4 (4). pp. 559-567. ISSN 1726-4170

Algal blooms

Pinhassi, Jarone, Sala, Maria Montserrat, Havskum, Harry, Peters, Francesc, Guadayol, Oscar, Malits, Andrea and Marrase, Celia (2004) Changes in bacterioplankton composition under different phytoplankton regimens. Applied and Environmental Microbiology, 70 (11). pp. 6753-6766. ISSN 0099-2240

Alkali stress

Mollapour, Mehdi, Phelan, Oohn P., Millson, Stefan H., Piper, Peter W. and Cooke, Frank T. (2006) Weak acid and alkali stress regulate phosphatidylinositol bisphosphate synthesis in Saccharomyces cerevisiae. Biochemical Journal, 395 (1). pp. 73-80. ISSN 0264-6021

Almonds

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Evaluation of selective and non-selective plating media for recovery of Salmonella enteritidis PT 30 (SEPT 30), Salmonella seftenberg 775W (775W) and Salmonella typhimurium DT 104 (DT 104) colonies from heat treated almonds. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Alphaproteobacteria

Amino Acid Sequence

Cook, M. A., Osborn, A. M., Bettandorff, J. and Sobecky, P. A. (2001) Endogenous isolation of replicon probes for assessing plasmid ecology of marine sediment microbial communities. Microbiology, 147 (8). pp. 2089-2101. ISSN 1350-0872

Antarctic waters}

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Malits, Andrea and Pedros-Alio, Carlos (2009) Differential response of grazing and bacterial heterotrophic production to experimental warming in Antarctic waters. Aquatic Microbial Ecology, 54 (1). pp. 101-112. ISSN 0948-3055

Anti-Infective Agents

Dixon, Ron, Al-Nazawi, M. and Alderson, G. (2004) Permeabilising effects of sub-inhibitory concentrations of microcystin on the growth of Escherichia coli. FEMS Microbiology Letters, 230 (2). pp. 167-170. ISSN 0378-1097

Anti-tumor

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Antibiotic resistance

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Eales, Marcus G, Ferrari, Enrico, Goddard, Alan, Lancaster, Lorna, Sanderson, Peter and Miller, Clare (2018) Mechanistic and phenotypic studies of bicarinalin, BP100 and colistin action on Acinetobacter baumannii. Research in Microbiology, 169 (6). pp. 296-302. ISSN 0923-2508

Antibiotics susceptibility

Daramola, Bukola A., Williams, Ross and Dixon, Ron A. (2009) In vitro antibiotic susceptibility of Vibrio parahaemolyticus from environmental sources in Northern England. International Journal of Antimicrobial Agents, 34 (5). pp. 499-500. ISSN 0924-8579

Anticancer agents

Piper, P. W., Panaretou, B., Millson, S. H., Trumana, A., Mollapour, M., Pearl, L. H. and Prodromou, C. (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90Î², a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Piper, Peter W., Panaretou, Barry, Millson, Stefan H., Trumana, Andrew, Mollapour, Mehdi, Pearl, Laurence H. and Prodromou, Chrisostomos (2003) Yeast is selectively hypersensitised to heat shock protein 90 (Hsp90)-targetting drugs with heterologous expression of the human Hsp90β, a property that can be exploited in screens for new Hsp90 chaperone inhibitors. Gene, 302 (1-2). pp. 165-170. ISSN 0378-1119

Antimicrobial

Parmar, Anish, Iyer, Abhishek, Lloyd, Daniel, Vincent, Charlotte, Prior, Stephen, Taylor, Edward and Singh, Ishwar (2017) Syntheses of potent teixobactin analogues against methicillin-resistant Staphylococcus aureus (MRSA) through the replacement of L-allo-enduracididine with its isosteres. Chemical Communications, 53 (55). pp. 7788-7791. ISSN 1359-7345

Antimicrobial peptides

Antimicrobial resistance

Onarinde, Bukola, Zhao, Junren, Leonard, Justine and Dudkiewicz, Agnieszka (2019) Antimicrobial Resistance (AMR) Profiles of Lactic Acid Bacteria (LAB) Isolated from Fermented Meat Products of European Origin. In: IAFP'S European Symposium on Food Safety, 24 - 26 April, 2019, Nantes, France.

Apoptosis

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Aquatic environments

Arabidopsis thaliana

Millson, Stefan, van Oosten-Hawle, Patricija, Alkuriji, Mohammed A., Truman, Andrew, Siderius, Marco and Piper, Peter W. (2014) Cdc37 engages in stable, S14A mutation-reinforced association with the most atypical member of the yeast kinome, Cdk-activating kinase (Cak1). Cell Stress and Chaperones, 19 (5). pp. 695-703. ISSN 1355-8145

Archaea

Cameron, Karen A., Hodson, Andrew J. and Osborn, A. Mark (2012) Structure and diversity of bacterial, eukaryotic and archaeal communities in glacial cryoconite holes from the Arctic and the Antarctic. FEMS Microbiology Ecology, 82 (2). pp. 254-267. ISSN 0168-6496

Arctic Ocean

Vaque, Dolors, Guadayol, Oscar, Peters, Francesc, Felipe, Jordi, Angel-Ripoll, Laia, Terrado, Ramon, Lovejoy, Connie and Pedros-Alio, Carlos (2008) Seasonal changes in planktonic bacterivory rates under the ice-covered coastal Arctic Ocean. Limnology and Oceanography, 53 (6). pp. 2427-2438. ISSN 0024-3590

Artificial inoculation

Onarinde, Bukola, Dudkiewicz, Agnieszka and Mercier, Gregoire (2017) Survival of Salmonella typhimurium DT104 and Salmonella senftenberg 775W on blanched almonds and skin-on almonds exposed to hot oil. In: Microbiology Society General Meeting, April 3 - 6 2017, Edinburgh.

Athletes

Jones, Arwel, Thatcher, Rhys, Mur, Luis A. J., Cameron, Simon J. S., Beecroft, Marikka and Davison, Glen (2013) Exploring the mechanisms behind the effects of chronic bovine colostrum supplementation on risk of upper respiratory tract infection. International Journal of Exercise Science: Conference Proceedings, 10 (1). ISSN 1939-795X

Atomic force microscopy

B lymphocyte

Baaten, B. J. G., Staines, K. A., Smith, L. P., Skinner, H., Davison, T. F. and Butter, C. (2009) Early replication in pulmonary B cells after infection with marek's disease herpesvirus by the respiratory route. Viral Immunology, 22 (6). pp. 431-444. ISSN 0882-8245

B-Lymphocytes

BITOX

Ferrari, Enrico, Maywood, Elizabeth S., Restani, Laura, Caleo, Matteo, Pirazzini, Marco, Rossetto, Ornella, Hastings, Michael H., Niranjan, Dhevahi, Schiavo, Giampietro and Davletov, Bazbek (2011) Re-assembled botulinum neurotoxin inhibits CNS Functions without systemic toxicity. Toxins, 3 (4). pp. 345-355. ISSN 2072-6651

BOTOX

Bacillariophyta

Haynes, K., Hofmann, T. A., Smith, C. J., Ball, A. S., Underwood, G. J. C. and Osborn, A. M. (2007) Diatom-derived carbohydrates as factors affecting bacterial community composition in estuarine sediments. Applied and Environmental Microbiology, 73 (19). pp. 6112-6124. ISSN 0099-2240

Bacillus

Hart, Mark C., Elliott, Geoff N., Osborn, A. Mark, Ritchie, Donald A. and Strike, Peter (1998) Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil. FEMS Microbiology Ecology, 27 (1). pp. 73-84. ISSN 0168-6496

Phoenix, David A., Harris, Frederick, Mura, Manuela and Dennison, Sarah R. (2015) The increasing role of phosphatidylethanolamine as a lipid receptor in the action of host defence peptides. Progress in Lipid Research, 59 . pp. 26-37. ISSN 0163-7827

Bacillus (bacterium)

Hassan, Muhammad Nadeem, Osborn, A. Mark and Hafeez, Fauzia Yusuf (2010) Molecular and biochemical characterization of surfactin producing Bacillus species antagonistic to Colletotrichum falcatum Went causing sugarcane red rot. African Journal of Microbiology Research, 4 (20). pp. 2137-2142. ISSN 1996-0808

Bacillus licheniformis

Mason, Vince P., Syrett, Natalie, Hassanali, Tasneem and Osborn, A. Mark (2002) Diversity and linkage of replication and mobilisation genes in Bacillus rolling circle-replicating plasmids from diverse geographical origins. FEMS Microbiology Ecology, 42 (2). pp. 235-241. ISSN 0168-6496

Bacillus sp.

Bacillus subtilis

Bacteria

Bossio, D. A., Girvan, M .S., Verchot, L., Bullimore, J., Borelli, T., Albrecht, A., Scow, K. M., Ball, A. S., Pretty, J. N. and Osborn, Mark (2005) Soil microbial community response to land use change in an agricultural landscape of western Kenya. Microbial Ecology, 49 (1). pp. 50-62. ISSN 0095-3628

Eales, Marcus (2015) The visualisation of interactions between Acinetobacter baumannii and the antimicrobial peptides: colistin sulphate, bicarinalin and BP100. MRes thesis, University of Lincoln.

El baidouri, Fouad, Venditti, Chris and Humphries, Stuart (2017) Independent evolution of shape and motility allows evolutionary flexibility in Firmicutes bacteria. Nature Ecology & Evolution, 1 (1). 0009. ISSN 2397-334X

Girvan, Martina S., Bullimore, Juliet, Pretty, Jules N., Osborn, A. Mark and Ball, Andrew S. (2003) Soil type is the primary determinant of the composition of the total and active bacterial communities in arable soils. Applied and Environmental Microbiology, 69 (3). pp. 1800-1809. ISSN 0099 2240

Laverock, Bonie, Smith, Cindy J., Tait, Karen, Osborn, A. Mark, Widdicombe, Steve and Gilbert, Jack A. (2010) Bioturbating shrimp alter the structure and diversity of bacterial communities in coastal marine sediments. ISME Journal, 4 (12). pp. 1531-1544. ISSN 1751-7362

Magro, Massimiliano, Fasolato, Luca, Bonaiuto, Emanuela, Andreani, Nadia, Baratella, Davide, Corraducci, Vittorino, Miotto, Giovanni, Cardazzo, Barbara and Vianello, Fabio (2016) Enlightening mineral iron sensing in Pseudomonas fluorescens by surface active maghemite nanoparticles: Involvement of the OprF porin. Biochimica et Biophysica Acta (BBA) - General Subjects, 1860 (10). pp. 2202-2210. ISSN 0304-4165

Malits, A., Peters, F., Bayer-Giraldi, M., Marrase, C., Zoppini, A., Guadayol, Oscar and Alcaraz, M. (2004) Effects of small-scale turbulence on bacteria: a matter of size. Microbial Ecology, 48 (3). pp. 287-299. ISSN 0095-3628

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Williams, D. Ross and Chanos, Panagiotis (2012) Application of anti-listerial bacteriocins: monitoring enterocin expression by multiplex relative reverse transcription–PCR. Biochemical Society Transactions, 40 (6). pp. 1544-1548. ISSN 0300-5127

Bacteria (microorganisms)

Etebu, Ebimieowei and Osborn, A. Mark (2010) Molecular quantification of the pea footrot disease pathogen (Nectria haematococca) in agricultural soils. Phytoparasitica, 38 (5). pp. 447-454. ISSN 0334-2123

Hanlon, A. R. M., Bellinger, B., Haynes, K., Xiao, G., Hofmann, T. A., Gretz, M. R., Ball, A. S., Osborn, A. M. and Underwood, G. J. C. (2006) Dynamics of extracellular polymeric substance (EPS) production and loss in an estuarine, diatom-dominated, microalgal biofilm over a tidal emersion-immersion period. Limnology and Oceanography, 51 (1 I). pp. 79-93. ISSN 0024-3590

McKew, B. A., Coulon, F., Osborn, A. M., Timmis, K. N. and McGenity, T. J. (2007) Determining the identity and roles of oil-metabolizing marine bacteria from the Thames estuary, UK. Environmental Microbiology, 9 (1). pp. 165-176. ISSN 1462-2912

McKew, Boyd A., Coulon, Frederic, Yakimov, Michail M., Denaro, Renata, Genovese, Maria, Smith, Cindy J., Osborn, A. Mark, Timmis, Kenneth N. and McGenity, Terry J. (2007) Efficacy of intervention strategies for bioremediation of crude oil in marine systems and effects on indigenous hydrocarbonoclastic bacteria. Environmental Microbiology, 9 (6). pp. 1562-1571. ISSN 1462-2912

Bacterial Physiological Phenomena

Bacterial Proteins

Bruce, K. D., Osborn, A. M., Pearson, A. J., Strike, P. and Ritchie, D. A. (1995) Genetic diversity within mer genes directly amplified from communities of noncultivated soil and sediment bacteria. Molecular Ecology, 4 (5). pp. 605-612. ISSN 0962-1083

Smith, C. J., Nedwell, D. B., Dong, L. F. and Osborn, A. M. (2007) Diversity and abundance of nitrate reductase genes (narG and napA), nitrite reductase genes (nirS and nrfA), and their transcripts in estuarine sediments. Applied and Environmental Microbiology, 73 (11). pp. 3612-3622. ISSN 0099-2240

Bacterial Typing Techniques

Bacterial biofilm

Bacterial heterotrophic productio

Bacterial production

Simo, Rafel, Vila-Costa, Maria, Alonso-Saez, Laura, Cardelus, Clara, Guadayol, Oscar, Vazquez-Dominguez, Evaristo and Gasol, Josep M. (2009) Annual DMSP contribution to S and C fluxes through phytoplankton and bacterioplankton in a NW Mediterranean coastal site. Aquatic Microbial Ecology, 57 (1). pp. 43-55. ISSN 0948-3055

Bacterial removal

Bacteriocin

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Bacteriology

Bacteriophage

Onarinde, Bukola and Dixon, Ron (2018) Prospects for biocontrol of Vibrio parahaemolyticus contamination in blue mussels (Mytilus edulus) – a year-long study. Frontiers in Microbiology, 9 . p. 1043. ISSN 1664-302X

Bacterioplankton composition

Bacterium

Chanos, P. and Williams, D. R. (2011) Anti-Listeria bacteriocin-producing bacteria from raw ewe’s milk in northern Greece. Journal of Applied Microbiology, 110 (3). pp. 757-768. ISSN 1364-5072

Base Sequence

Etebu, E. and Osborn, A. M. (2009) Molecular assays reveal the presence and diversity of genes encoding pea footrot pathogenicity determinants in nectria haematococca and in agricultural soils. Journal of Applied Microbiology, 106 (5). pp. 1629-1639. ISSN 1364-5072

Osborn, A. M., Bruce, K. D., Ritchie, D. A. and Strike, P. (1996) The mercury resistance operon of the IncJ plasmid pMERPH exhibits structural and regulatory divergence from other Gram-negative mer operons. Microbiology, 142 (2). pp. 337-345. ISSN 1350-0872

Pearson, A. J., Bruce, K. D., Osborn, A. M., Ritchie, D. A. and Strike, P. (1996) Distribution of class II transposase and resolvase genes in soil bacteria and their association with mer genes. Applied and Environmental Microbiology, 62 (8). pp. 2961-2965. ISSN 0099-2240

Benghazi

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2011) Genetic data provided by 15 autosomal STR loci in the Libyan population living in Benghazi. In: 7th National FORREST Conference, 29 - 30 June 2011, Nottingham, UK.

Benghazi region

Elmrghni, Samir, Dixon, R. A. and Williams, D. R. (2010) Haplotypes for 17 Y-chromosomal STR loci in a population from eastern Libya (Benghazi region). In: 7th International Y Chromosome User Workshop and 4th International EMPOP, 22 - 24 April 2010, Berlin, Germany.

Betaproteobacteria

Bioassay

Biochemistry

Panaretou, Barry, Siligardi, Giuliano, Meyer, Philippe, Maloney, Alison, Sullivan, Janis K., Singh, Shradha, Millson, Stefan H., Clarke, Paul A., Naaby-Hansen, Soren, Stein, Rob, Cramer, Rainer, Mollapour, Mehdi, Workman, Paul, Piper, Peter W., Pearl, Laurence H. and Prodromou, Chrisostomos (2002) Activation of the ATPase activity of Hsp90 by the stress-regulated cochaperone Aha1. Molecular Cell, 10 (6). pp. 1307-1318. ISSN 1097-2765

Biodegradation, Environmental

Coulon, Frederic, McKew, Boyd A., Osborn, A. Mark, McGenity, Terry J. and Timmis, Kenneth N. (2007) Effects of temperature and biostimulation on oil-degrading microbial communities in temperate estuarine waters. Environmental Microbiology, 9 (1). pp. 177-186. ISSN 1462-2912

Biodeterioration

Skipper, P. J. A., Schulze, H., Williams, D. R. and Dixon, R. A. (2016) Biodeterioration of limestone built heritage: a multidisciplinary challenge. In: Science and art: a future for stone. Proceedings of the 13th International Congress on the Deterioration and Conservation of Stone. University of the West of Scotland, Paisley, pp. 139-146. ISBN 9781903978573

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Biodiesel

Uthandi, Sivakumar, Kaliyaperumal, Ashokkumar, Srinivasan, Naganandhini, Thangavelu, Kiruthika, Muniraj, Iniya Kumar, Zhan, Xinmin, Gathergood, Nicholas and Gupta, Vijai Kumar (2021) Microbial biodiesel production from lignocellulosic biomass: New insights and future challenges. Critical Reviews in Environmental Science and Technology . pp. 1-30. ISSN 1064-3389

Biodiversity

Adetutu, E. M., Ball, A. S. and Osborn, A. M. (2008) Azoxystrobin and soil interactions: degradation and impact on soil bacterial and fungal communities. Journal of Applied Microbiology, 105 (6). pp. 1777-1790. ISSN 1364 5072

Biofilm

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Biofilm formation

Biofilms

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Skipper, Philip, Skipper, Lynda and Dixon, Ron (2022) A metagenomic analysis of the bacterial microbiome of limestone, and the role of associated biofilms in the biodeterioration of heritage stone surfaces. Scientific Reports, 12 (1). pp. 1-18. ISSN 2045-2322

Biogeochemical

Biomolecules

Molina, Gustavo, Gupta, Vijai, Singh, Brahma and Gathergood, Nicholas, eds. (2020) Bioprocessing for Biomolecules Production. Wiley. ISBN 9781119434320

Blotting, Southern

Nogales, Balbina, Timmis, Kenneth N., Nedwell, David B. and Osborn, A. M. (2002) Detection and diversity of expressed denitrification genes in estuarine sediments after reverse transcription-PCR amplification from mRNA. Applied and Environmental Microbiology, 68 (10). pp. 5017-5025. ISSN 0099-2240

Blue mozzarella

Andreani, N. A., Martino, M. E., Fasolato, L., Carraro, L., Montemurro, F., Mioni, R., Bordin, P. and Cardazzo, B. (2014) Tracking the blue: a MLST approach to characterise the Pseudomonas fluorescens group. Food Microbiology, 39 . pp. 116-126. ISSN 0740-0020

Andreani, Nadia, Carraro, Lisa, Martino, Maria Elena, Fondi, Marco, Fasolato, Luca, Miotto, Giovanni, Magro, Massimiliano, Vianello, Fabio and Cardazzo, Barbara (2015) A genomic and transcriptomic approach to investigate the blue pigment phenotype in Pseudomonas fluorescens. International Journal of Food Microbiology, 213 . pp. 88-98. ISSN 0168-1605

Boundary shear stress

Brazil nuts

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

British butter

Dudkiewicz, Agnieszka, Hayes, William and Onarinde, Bukola (2022) Sensory quality and shelf-life of locally produced British butters compared to large-scale, industrially produced butters. British Food Journal . ISSN 0007-1013

Bursa of Fabricius

CD4+ T lymphocyte

CD8+ T lymphocyte

COVID-19

Katowa, Ben, Kalonda, Annie, Mubemba, Benjamin, Matoba, Japhet, Shempela, Doreen Mainza, Sikalima, Jay, Kabungo, Boniface, Changula, Katendi, Chitanga, Simbarashe, Kasonde, Mpanga, Kapona, Otridah, Kapata, Nathan, Musonda, Kunda, Monze, Mwaka, Tembo, John, Bates, Matthew, Zumla, Alimuddin, Sutcliffe, Catherine G., Kajihara, Masahiro, Yamagishi, Junya, Takada, Ayato, Sawa, Hirofumi, Chilengi, Roma, Mukonka, Victor, Muleya, Walter and Simulundu, Edgar (2022) Genomic Surveillance of SARS-CoV-2 in the Southern Province of Zambia: Detection and Characterization of Alpha, Beta, Delta, and Omicron Variants of Concern. Viruses, 14 (9). p. 1865. ISSN 1999-4915

Roe, Charlotte, Lowe, Madison, Williams, Benjamin and Miller, Clare (2021) Public Perception of SARS-CoV-2 Vaccinations on Social Media: Questionnaire and Sentiment Analysis. International Journal of Environmental Research and Public Health, 18 (24). p. 13028. ISSN 1660-4601

CXCL10

Koetzler, Rommy, Zaheer, Raza S., Wiehler, Shahina, Holden, Neil S., Giembycz, Mark A. and Proud, David (2009) Nitric oxide inhibits human rhinovirus-induced transcriptional activation of CXCL10 in airway epithelial cells. The Journal of Allergy and Clinical Immunology, 123 (1). 201-208.e9. ISSN 0091-6749

Caco-2 cells

PRIMITIVO, Maria João, NEVES, Marta, PIRES, Cristiana L., CRUZ, Pedro F., BRITO, Catarina, RODRIGUES, Ana C., de CARVALHO, Carla C. C. R., Mortimer, Megan M., MORENO, Maria João, BRITO, Rui M. M., Taylor, Edward J., Millson, Stefan H., REBOREDO, Fernando, Jorge CAMPOS, Maria, VAZ, Daniela C. and RIBEIRO, Vânia S. (2022) Edible flowers of Helichrysum italicum: Composition, Nutritive Value, and Bioactivities. Food Research International, 157 . p. 111399. ISSN 1873-7145

Callianassa subterranea

Cancer

Prodromou, Chrisostomos, Nuttall, James M., Millson, Stefan H., Roe, S. Mark, Sim, Tiow-Suan, Tan, Doreen, Workman, Paul, Pearl, Laurence H. and Piper, Peter W. (2009) Structural basis of the radicicol resistance displayed by a fungal Hsp90. Acs Chemical Biology, 4 (4). pp. 289-297. ISSN 1554-8929

Cancer drug resistance

Millson, S. H., Chuang, C.-H., Roe, S. M., Polier, S., Solovieva, S., Pearl, L. H., Sim, T.-S. and Prodromou, C. (2011) Features of the Streptomyces hygroscopicus HtpG reveal how partial geldanamycin resistance can arise with mutation to the ATP binding pocket of a eukaryotic Hsp90. FASEB Journal, 25 (11). pp. 3828-3837. ISSN 0892-6638

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Carbohydrates

Carbon

Carrier Proteins

Cation Transport Proteins

Cdc37p;Sti1

Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi and Piper, Peter W. (2009) The Hsp90/Cdc37p chaperone system is a determinant of molybdate resistance in Saccharomyces cerevisiae. Yeast, 26 (6). pp. 339-347. ISSN 0749-503X

Cell Size

Cell wall

Cells

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Cells, Cultured

Cellulose Acetate

Degli-Innocenti, Francesco, Goglino, Giorgia, Tosin, Maurizio, Bellia, Gaetano, Monciardini, P and Cavalletti, L (2002) Isolation and characterisation of thermophilic micro-organisms able to grow on cellulose acetate. In: Microbiology of Composting. Springer, pp. 273-286. ISBN UNSPECIFIED

Chaperone inhibitors

Chemical communication

Günther, Catrin S., Goddard, Matthew R., Newcomb, Richard D. and Buser, Claudia C. (2015) The context of chemical communication driving a mutualism. Journal of Chemical Ecology, 41 (10). pp. 929-936. ISSN 0098-0331

Chemostat culture

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Chemotaxis

Suttey, Liam (2021) Swimming Mobility and Chemotaxis of Soil Bacteria. MRes thesis, University of Lincoln.

Chickens

Chromogenic agar

Chromosome Mapping

Chromosomes, Bacterial

Osborn, A. M., da Silva Tatley, F. M., Steyn, L. M., Pickup, R. W. and Saunders, J. R. (2000) Mosaic plasmids and mosaic replicons: Evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology, 146 (9). pp. 2267-2275. ISSN 1350-0872

Osborn, A. Mark and Boltner, Dietmar (2002) When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuum. Plasmid, 48 (3). pp. 202-212. ISSN 0147-619X

Ciliophora

Clathrin

Cloning

Cloning, Molecular

Osborn, A. Mark, Pickup, Roger W. and Saunders, Jon R. (2000) Development and application of molecular tools in the study of IncN-related plasmids from lakewater sediments. FEMS Microbiology Letters, 186 (2). pp. 203-208. ISSN 0378-1097

Clostridium perfringens

Dennes, Ellen (2020) Isolation and characterisation of novel Clostridium perfringens bacteriophage from sewage effluent, and evaluation of parameters for potential therapeutic use. MRes thesis, University of Lincoln.

Omoigberale, May (2021) Evaluating the impact of alternative antimicrobials on biofilms formed by Clostridium perfringens. PhD thesis, University of Lincoln.

Cluster Analysis

Coastal osmotrophic plankton

Guadayol, Oscar, Peters, Francesc, Marrase, Celia, Gasol, Josep M., Roldan, Cristina, Berdalet, Elisa, Massana, Ramon and Sabata, Anna (2009) Episodic meteorological and nutrient-load events as drivers of coastal planktonic ecosystem dynamics: a time-series analysis. Marine Ecology Progress Series, 381 . pp. 139-155. ISSN 0171-8630

Colicin

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Colicin E3

Lancaster, Lorna, Savelsbergh, Andreas, Kleanthous, Colin, Wintermeyer, Wolfgang and Rodnina, Marina (2008) Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes. Molecular Microbiology, 69 (2). pp. 390-401. ISSN 0950-382X

Collagen accumulation

Rippon, M. G., Springett, K., Walmsley, R., Patrick, K. and Millson, S. (1998) Ultrasound assessment of skin and wound tissue: comparison with histology. Skin Research and Technology, 4 (3). pp. 147-154. ISSN 0909-752X

Colletotrichum

Colony Count, Microbial

Community

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Community structures

Compact dry

Aiyedun, Susanna, Swainson, Mark, Dixon, Ron and Onarinde, Bukola (2021) Comparison of Compact Dry and Conventional ISO Methods for Microbiological Survey of Lettuce Varieties at Retail Stage. In: IAFP European Symposium on Food Safety, 27 - 28 April 2021.

Comparative genomics and transcriptomics

Compositional characterization

Compositional shifts

Conjugation, Genetic

Conservation

Skipper, Philip (2018) 'Biodeterioration of limestone: role of bacterial biofilms and possible intervention strategies'. PhD thesis, University of Lincoln.

Conservation of Natural Resources

Conserved Sequence

Contributory factor

Conventional ISO methods

Crabtree effect

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

Crops

Cryoconite

Cucumis melo

Ortali, Arianna and Onarinde, Bukola (2021) Growth Potential of Listeria monocytogenes on Cantaloupe (cucumis melo) pulp evaluation under a dynamic time-temperature profile. In: ASM Microbe 2021, 20 - 24 June 2021, Online.

Cyanobacteria

Cycloclasticus

Cytokines

Cytoskeleton

Wolfson, Eliza B., Elvidge, Johanna, Tahoun, Amin, Gillespie, Trudi, Mantell, Judith, McAteer, Sean P., Rossez, Yannick, Paxton, Edith, Lane, Fiona, Shaw, Darren J., Gill, Andrew, Stevens, Jo, Verkade, Paul, Blocker, Ariel, Mahajan, Arvind and Gally, David L. (2020) The interaction of Escherichia coli O157 :H7 and Salmonella Typhimurium flagella with host cell membranes and cytoskeletal components. Microbiology . ISSN 1350-0872

D-Value

DGGE

DNA

Holden, Neil S. and Tacon, Claire E. (2011) Principles and problems of the electrophoretic mobility shift assay. Journal of Pharmacological and Toxicological Methods, 63 (1). pp. 7-14. ISSN 1056-8719

Hu, Bin, Liao, Chunyan, Millson, Stefan H., Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H., Piper, Peter W. and Panaretou, Barry (2005) Qri2/Nse4, a component of the essential Smc5/6 DNA repair complex: Nse4, an essential cell cycle protein. Molecular Microbiology, 55 (6). pp. 1735-1750. ISSN 0950-382X

Millson, Stefan H., Truman, Andrew W., King, Victoria, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

DNA DNA hybridization

Bruce, K. D., Hiorns, W. D., Hobman, J. L., Osborn, A. M., Strike, P. and Ritchie, D. A. (1992) Amplification of DNA from native populations of soil bacteria by using the polymerase chain reaction. Applied and Environmental Microbiology, 58 (10). pp. 3413-3416. ISSN 0099-2240

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1993) Polymerase chain reaction-restriction fragment length polymorphism analysis shows divergence among mer determinants from gram-negative soil bacteria indistinguishable by DNA-DNA hybridization. Applied and Environmental Microbiology, 59 (12). pp. 4024-4030. ISSN 0099-2240

DNA Helicases

DNA Nucleotidyltransferases

DNA Primers

DNA Probes

DNA Transposable Elements

DNA fingerprinting

Richards, Keith D., Goddard, Matthew R. and Gardner, Richard C. (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology, 96 (3). pp. 355-359. ISSN 0003-6072

DNA fragment

DNA fragment, bacterial genetics

DNA sequence

DNA sequencing

Shuaib, Yassir A, Utpatel, Christian, Kohl, Thomas A, Barilar, Ivan, Diricks, Margo, Ashraf, Nadia, Wieler, Lothar H, Kerubo, Glennah, Mesfin, Eyob A, Diallo, Awa Ba, Al-Hajoj, Sahal, Ndung'u, Perpetua, Fitzgibbon, Margaret M, Vaziri, Farzam, Sintchenko, Vitali, Martinez, Elena, Viegas, Sofia O, Zhou, Yang, Azmy, Aya, Al-Amry, Khaled, Godreuil, Sylvain, Varma-Basil, Mandira, Narang, Anshika, Ali, Solomon, Beckert, Patrick, Dreyer, Viola, Kabwe, Mwila, Bates, Matthew, Hoelscher, Michael, Rachow, Andrea, Gori, Andrea, Tekwu, Emmanuel M, Sidze, Larissa K, Jean-Paul, Assam A, Beng, Veronique P, Ntoumi, Francine, Frank, Matthias, Diallo, Aissatou Gaye, Mboup, Souleymane, Tessema, Belay, Beyene, Dereje, Khan, Sadiq N, Diel, Roland, Supply, Philip, Maurer, Florian P, Hoffmann, Harald, Niemann, Stefan and Merker, Matthias (2022) Origin and Global Expansion of Complex Lineage 3. Genes, 13 (6). ISSN 2073-4425

DNA template

Osborn, A. Mark, Moore, Edward R. B. and Timmis, Kenneth N. (2000) An evaluation of terminal-restriction fragment length polymorphism (T-RFLP) analysis for the study of microbial community structure and dynamics. Environmental Microbiology, 2 (1). pp. 39-50. ISSN 1462-2912

DNA, Bacterial

DNA, Fungal

DNA, Ribosomal

DNA, Viral

DNA, plasmid, article

DNA-Binding Proteins

DNA-Directed DNA Polymerase

Decapoda (Crustacea)

Deltaproteobacteria

Denaturing gradient gel electrophoresis

Denitrification

Detection of Escherichia coli DNA

Dixon, Ron and Agarwal, M. (2010) Detection of Escherichia coli DNA from interstitial cystitis bladder biopsies provides little evidence of a causal microbe. The Internet Journal of Urology, 7 (1). ISSN 1528-8390

Dextranase expression

Li, Xingmin, Millson, Stefan H., Coker, Raymond D. and Evans, Ivor H. (2006) Cloning and expression of Penicillium minioluteum dextranase in Saccharomyces cerevisiae and its exploitation as a reporter in the detection of mycotoxins. Biotechnology Letters, 28 . pp. 1955-1964. ISSN 0141-5492

Diatoms

Didinium nasutum

Dimethylsulfid

Dimethylsulfoniopropionate

Discrete time control systems

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Dissimilatory nitrate reduction

Dose-Response Relationship, Drug

Dose-Response Relationship, Immunologic

Drinking water

Deines, P., Sekar, P., Jensen, H. S., Tait, S., Boxall, J. B., Osborn, A. M. and Biggs, C. A. (2010) MUWS (Microbiology in urban water systems): an interdisciplinary approach to study microbial communities in urban water systems. Drinking Water Engineering and Science, 3 (2). pp. 91-99. ISSN 1996-9457

Drinking water distribution system

Drinking water distribution systems

Drosophila

Gunther, Catrin, Knight, Sarah, Jones, Rory and Goddard, Matthew (2019) Are Drosophila preferences for yeasts stable or contextual? Ecology and Evolution, 9 (14). pp. 8075-8086. ISSN 2045-7758

Drug Resistance

Quinonez, Camila G, Lee, Jae Jin, Lim, Juhyeon, Odell, Mark, Lawson, Christopher P, Anyogu, Amararachukwu, Raheem, Saki and Eoh, Hyungjin (2022) The Role of Fatty Acid Metabolism in Drug Tolerance of Mycobacterium Tuberculosis. mBio, 13 (1). e03559. ISSN 2150-7511

Drug Resistance, Microbial

Lloyd-Jones, Gareth, Osborn, A. Mark, Ritchie, Donald A., Strike, Peter, Hobman, Jon L., Brown, Nigel L. and Rouch, Duncan A. (1994) Accumulation and intracellular fate of tellurite in tellurite-resistant Escherichia coli: a model for the mechanism of resistance. FEMS Microbiology Letters, 118 (1-2). pp. 113-119. ISSN 0378-1097

Osborn, A. Mark, Bruce, Kenneth D., Strike, Peter and Ritchie, Donald A. (1997) Distribution, diversity and evolution of the bacterial mercury resistance (mer) operon. FEMS Microbiology Reviews, 19 (4). pp. 239-262. ISSN 0168-6445

Drug Synergism

Drug labelling

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Drug resistance

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Tan, Kevin and Lear, Martin (2010) Scientists tag malaria superbugs. Singapore Press Holdings.

E. coli

Aiyedun, Susanna, Dixon, Ron and Onarinde, Bukola (2022) Effect of Ultraviolet Light Treatment on Microbial Reduction and Quality of Lettuce Varieties. In: IAFP 2022 Annual Meeting, July 31 - August 3, Pittsburgh, Pennsylvania.

Anvarian, Amir, Smith, MP and Overton, TW (2018) Use of flow cytometry and total viable count to determine the effects of orange juice composition on the physiology of Escherichia coli. Food Science and Nutrition . ISSN 2048-7177

Gillett, Alice, Waugh, David, Lawrence, Jonathan, Swainson, Mark and Dixon, Ron (2016) Laser surface modification for the prevention of biofouling by infection causing Escherichia Coli. Journal of Laser Applications, 28 (2). 022503. ISSN 1042-346X

EMSA

East Africa

Eastern Hemisphere

Ecology

Goddard, Matthew R. (2016) Microbiology: mixing wine, chocolate, and coffee. Current Biology, 26 (7). R275-R277. ISSN 0960-9822

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Ecosystem

Prosser, J. I., Bohannan, B. J. M., Curtis, T. P., Ellis, R. J., Firestone, M. K., Freckleton, R. P., Green, J. L., Green, L. E., Killham, K., Lennon, J. J., Osborn, A. M., Solan, M., van der Gast, C. J. and Young, J. P. W. (2007) The role of ecological theory in microbial ecology. Nature Reviews Microbiology, 5 (5). pp. 384-392. ISSN 1740-1526

Edible wildflowers

Electrophoresis

End-labelling

England

Enterobacteriaceae

Enteroccoccus faecium

Onarinde, Bukola, Lovatt, Pauline, Khatri, Yunus and Meerdink, Gerrit (2017) Effect of added water and steam on the heat resistance of Salmonella enteritidis phage type 30 surrogate, Enterococcus faecium on blanched peanuts, cashews, pumpkin seeds, red skin peanuts and walnut. In: International Association for Food Protection Annual Meeting, July 9 - 12, 2017, USA.

Environmental

Environmental Microbiology

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Environmental Pollutants

Enzymes

Epidemiology

Episodic meteorological forcing

Equipment Design

Escherichia coli

Anvarian, Amir, Smith, MP and Overton, TW (2019) Flow cytometry and growth‐based analysis of the effects of fruit sanitation on the physiology of Escherichia coli in orange juice. Food Science and Technology . pp. 1-12. ISSN 2048-7177

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

Eschericia coli

Dixon, Ron (2008) Role of the cell envelope in the antibacterial activities of cyclic polypeptides against Eschericia coli. In: 2nd World Conference on Magic Bullets, 3rd - 5th October 2008, Nuremberg, Germany.

Essex England

Estuaries

Estuarine sediments

Eukaryota

Eurasia

Europe

Evaluation Studies

Evolution

Evolution, Molecular

Expression analysis

Fab1p

Fabaceae

Fatty Acid Metabolism

Fatty Acids

Fault diagnosis

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Fault tolerant control

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Feathers

Female

Fermentation

Fermented meat product

Fertilizers

Finite automata

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Finite state machines

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Firmicutes

Fish

Fish analysis

Flagellate grazing

Flow condition

Flow cytometry

Fluorescent in situ hybridization

Fluorescent labels

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Food hazards

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Impact of food hazards in school meals on students' health, academic work and finance – Senior High School students' report from Ashanti Region of Ghana. Food Control, 62 . pp. 56-62. ISSN 0956-7135

Food hygiene and safety

Ababio, Patricia, Daramola, Bukola, Taylor, Tony and Swainson, Mark (2016) Food law compliance in developed and developing countries: comparing school kitchens in Lincolnshire–UK and Ashanti Region of Ghana. Food Control, 68 . pp. 167-173. ISSN 0956-7135

Food law compliance

Food safety

Ababio, Patricia, Taylor, Tony, Swainson, Mark and Daramola, Bukola (2016) Effect of good hygiene practices intervention on food safety in senior secondary schools in Ghana. Food Control, 60 . pp. 18-24. ISSN 0956-7135

Food spoilage

Food web

Foodborne Diseases

Foodborne outbreaks

Aiyedun, Susanna, Onarinde, Bukola, Swainson, Mark and Dixon, Ron (2021) Foodborne Outbreaks of Microbial Infection from Fresh Produce in Europe And North America: A Systematic Review of Data from This Millennium. International Journal of Food Science and Technology, 56 (5). pp. 2215-2223. ISSN 0950-5423

Fresh Water

Functional genes

Fungal Proteins

Fungal protein

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Fungi

Morrison-Whittle, Peter and Goddard, Matthew (2015) Quantifying the relative roles of selective and neutral processes in defining eukaryotic microbial communities. The ISME Journal, 9 (9). pp. 2003-2011. ISSN 1751-7362

Fusarium

Fusarium solani

Gallus gallus

Gammaproteobacteria

Geldanamycin

Gels

Gene Amplification

Gene Transfer, Horizontal

Gene function

Genes

Genes, Bacterial

Genes, Regulator

Genetic Predisposition to Disease

Genetic Techniques

Genetic Variation

Genetic potential

Genomics

Genotype

Geologic Sediments

Smith, Cindy J., Nedwell, David B., Dong, Liang F. and Osborn, A. Mark (2006) Evaluation of quantitative polymerase chain reaction-based approaches for determining gene copy and gene transcript numbers in environmental samples. Environmental Microbiology, 8 (5). pp. 804-815. ISSN 1462-2912

Ghanaian schools

Glacier

Glomales

Glomerales

Glomerella tucumanensis

Glycoproteins

Good hygiene practices (GHP)

Gram negative bacterium

Gram positive bacterium

Gram-Negative Bacteria

Gram-Positive Bacteria

Omoigberale, May (2021) Evaluating the impact of alternative antimicrobials on biofilms formed by Clostridium perfringens. PhD thesis, University of Lincoln.

Grazing rates

Grazing resistance

Great Britain

Growth potential

Haematonectria haematococca

Haematonectria haematococca mpVI

Haemophilus influenzae

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Hand-made butter

Haplotypes

Haptophyceae

Heat shock protein

Millson, Stefan H., Truman, Andrew W., King, Victoria, Prodromou, Crisostomos, Pearl, Lawrence H. and Piper, Peter W. (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., Mollapour, Mehdi, Prodromou, Chrisostomos and Piper, Peter W. (2007) In the yeast heat shock response, Hsf1-directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Heat shock response

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Heat shock transcription factor

Millson, S. H. and Piper, P. W. (2014) Insights from yeast into whether the rapamycin inhibition of heat shock transcription factor (Hsf1) can prevent the Hsf1 activation that results from treatment with an Hsp90 inhibitor. Oncotarget, 5 (13). pp. 5054-5064. ISSN 1949-2553

Heat treatment

Helichrysum italicumanti

Heritage

Herpesviridae

Herpesvirus 2, Gallid

Heterotrophic activity

High-throughput

Ch'ng, Jun-Hong, Mok, Sachel, Bozdech, Zbynek, Lear, Martin James, Boudhar, Aicha, Russell, Bruce, Nosten, Francois and Tan, Kevin Shyong-Wei (2013) A whole cell pathway screen reveals seven novel chemosensitizers to combat chloroquine resistant malaria. Scientific Reports, 3 (1734). ISSN 2045-2322

Hot oil

Hsp90

Piper, Peter and Millson, Stefan (2012) Spotlight on the microbes that produce heat shock protein 90-targeting antibiotics. Open Biology, 2 (DEC). ISSN 2046-2441

Hsp90 inhibitor resistance

Hsp90 inhibitors

Piper, P. W. and Millson, S. H. (2011) Mechanisms of resistance to Hsp90 inhibitor drugs: a complex mosaic emerges. Pharmaceuticals, 4 (11). pp. 1400-1422. ISSN 1424-8247

Hsp90 mutants

Hsp90; MAP kinase; Slt2(Mpk1); Transcription activation; Yeast.

Millson, Stefan H., Truman, Andrew W. and Piper, Peter W. (2022) Hsp90 and phosphorylation of the Slt2(Mpk1) MAP kinase activation loop are essential for catalytic, but not non-catalytic, Slt2-mediated transcription in yeast. Cell Stress and Chaperones, 27 (3). pp. 295-304. ISSN 1466-1268

Human rhinovirus

Hybrid protein

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Hydrocarbons

Hydrocarbons, Aromatic

IFN response factors

IFN-?–inducible protein of 10 kd

In-situ

Indicator bacteria

Indonesia

Dong, Liang F., Sobey, Milika Naqasima, Smith, Cindy J., Rusmana, Iman, Phillips, Wayne, Stott, Andrew, Osborn, A. Mark and Nedwell, David B. (2011) Dissimilatory reduction of nitrate to ammonium, not denitrification or anammox, dominates benthic nitrate reduction in tropical estuaries. Limnology and Oceanography, 56 (1). pp. 279-291. ISSN 0024-3590

Innate immunity

Inoculation

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Inoculation, Soils, carbon

Inorganic nitrogen

Insect debridement therapy

Barnes, K. M., Gennard, Dorothy and Dixon, Ron (2010) The antibacterial potency of the medicinal maggot Lucilia sericata (Meigen): variation in laboratory evaluation. Journal of Microbiological Methods, 82 (3). pp. 234-237. ISSN 0167-7012

Insufflation

Intervention

Iron sensing

JCNotOpen

Gayevskiy, Velimir and Goddard, Matthew R. (2016) Saccharomyces eubayanus and Saccharomyces arboricola reside in North Island native New Zealand forests. Environmental Microbiology, 18 (4). pp. 1137-1147. ISSN 1462-2920

JCOpen

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

Knight, Sarah and Goddard, Matthew R. (2015) Quantifying separation and similarity in a Saccharomyces cerevisiae metapopulation. The ISME Journal, 9 (2). pp. 361-370. ISSN 1751-7362

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Loh, Cheryl C. Y., Suwanarusk, Rossarin, Lee, Yan Quan, Chan, Kitti W. K., Choy, Kit-Ying, Rénia, Laurent, Russell, Bruce, Lear, Martin J., Nosten, François H., Tan, Kevin S. W., Chow, Larry M. C. and Snounou, Georges (2014) Characterization of the commercially-available fluorescent chloroquine-BODIPY conjugate, LynxTag-CQGREEN, as a marker for chloroquine resistance and uptake in a 96-well plate assay. PLoS ONE, 9 (10). e110800. ISSN 1932-6203

Kakamega

Kenya

Kinase

Truman, Andrew W., Millson, Stefan H., Nuttall, James M., King, Victoria, Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H. and Piper, Peter W. (2006) Expressed in the yeast saccharomyces cerevisiae, human ERK5 Is a client of the Hsp90 chaperone that complements loss of the Slt2p (Mpk1p) cell Integrity stress-activated protein kinase. Eukaryotic Cell, 5 (11). pp. 1914-1924. ISSN 1535-9778

Kitchen staff

KrF laser

L-allo-enduracididine

L.sericata

Barnes, K. M., Dixon, Ron and Gennard, Dorothy (2009) A model of competitive interactions between L.sericata and pathogenic bacteria found on a corpse. In: European Association of Forensic Entomology, 9th - 12th June 2009, Uppsala, Sweden.

Lactic Acid Bacteria

Landscape

Morrison-Whittle, Peter and Goddard, Matthew R. (2018) From vineyard to winery: a source map of microbial diversity driving wine fermentation. Environmental Microbiology, 20 (1). pp. 75-84. ISSN 1462-2912

Leafy green vegetable

Lettuce

Limestone

Linkage (Genetics)

Lipid II

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Listeria

Listeria monotocytogenes

Listeriosis

Local butter production

Lucilia sericata

Barnes, Katherine, Gennard, Dorothy and Dixon, Ron (2009) An assessment of the antibacterial activity in larval excretion/secretion from four carrion feeding species using Lucilia sericata (Meigen) as the marker species. In: BSAC Spring Meeting - Difficult to treat infections meeting; British Society of Antimicrobial Chemotherapy, 7th April 2009, Birmingham.

Lung

Lymphocyte Subsets

MRSA

Lloyd, Daniel G., Schofield, Benjamin J., Goddard, Matthew R. and Taylor, Edward J. (2020) De novo resistance to arg10-teixobactin occurs slowly and is costly. Antimicrobial Agents and Chemotherapy, 65 (1). e01152-20. ISSN 0066-4804

Singh, Ishwar and Walden, Benjamin (2018) Simplified teixobactin analogues to target superbugs. Future Medicinal Chemistry, 10 (2). ISSN 1756-8919

MVB trafficking

Macbecin

Maghemite nanoparticles

Malaria

Pallerla, Srinivas Reddy, Elion Assiana, Darrel Ornelle, Linh, Le Thi Kieu, Cho, Frederick Nchang, Meyer, Christian G., Fagbemi, Kaossarath Adédjokè, Adegnika, Ayola Akim, Beng, Véronique Penlap, Achidi, Eric A., Kahunu, Gauthier Mesia, Bates, Matthew, Grobusch, Martin P., Kremsner, Peter G., Ntoumi, Francine and Velavan, Thirumalaisamy P. (2021) Pharmacogenetic considerations in the treatment of co-infections with HIV/AIDS, tuberculosis and malaria in Congolese populations of Central Africa. International Journal of Infectious Diseases, 104 . pp. 207-213. ISSN 1201-9712

Tan, Kevin and Lear, Martin (2010) Scientists tag malaria superbugs. Singapore Press Holdings.

Malaria detection

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Management

Mardivirus

Marek Disease

Marine ecosystems

Marine systems

Iversen, Kriss Rokkan, Primicerio, Raul, Larsen, Aud, Egge, Jorun K., Peters, Francesc, Guadayol, Oscar, Jacobsen, Anita, Havskum, Harry and Marrase, Celia (2010) [Corrigendum to] Effects of small-scale turbulence on lower trophic levels under different nutrient conditions [vol 32, pg 197, 2010]. Journal of Plankton Research, 32 (4). p. 575. ISSN 0142-7873

Rokkan Iversen, Kriss, Primicerio, Raul, Larsen, Aud, Egge, Jorun K., Peters, Francesc, Guadayol, Oscar, Jacobsen, Anita, Havskum, Harry and Marrase, Celia (2010) Effects of small-scale turbulence on lower trophic levels under different nutrient conditions. Journal of Plankton Research, 32 (2). pp. 197-208. ISSN 0142-7873

Mass Spectrometry

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Mature Compost

Meals

Mediterranean}

Membrane Proteins

Membrane proteins

Mercury

Metabolomics

Methacrylates

Microbial

Microbial Sensitivity Tests

Microbial biofilm

Microbial diversity

Microbial ecology

Higgins, Peter, Grace, Cooper, Lee, Soon and Goddard, Matthew (2021) Whole genome sequencing from the New Zealand Saccharomyces cerevisiae population reveals the genomic impacts of novel microbial range expansion. 3G: Genes | Genomes | Genetics, 11 (1). ISSN 2160-1836

Microbiology

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Microbiome

Microcrystalline Cellulose

Microcystins

Microcystis

Microcystis aeruginosa

Microsatellite Repeats

Microscale patchiness

Guadayol, Òscar, Mendonca, Tania, Segura-Noguera, Mariona, Wright, Amanda J, Tassieri, Manlio and Humphries, Stuart (2021) Microrheology reveals microscale viscosity gradients in planktonic systems. Proceedings of the National Academy of Sciences, 118 (1). e2011389118. ISSN 0027-8424

Microscopy

Minimal Medium

Models, Biological

Models, Genetic

Molecular Sequence Data

Molecular structure

Molybdate

Mosaicism

Mss4p

Mucosal immunity

Multilocus Sequence Typing

Mutualism

Mycelium

Mycobacterium tuberculosis

Lee, Jae Jin, Lim, Juhyeon, Gao, Shengjia, Lawson, Christopher, Odell, Mark, Raheem, Saki, Woo, JeongIm, Kang, Sung-Ho, Jeon, Bo-Young and Eoh, Hyungjin (2018) Metabolic neutralization mitigates propionate toxicity in intracellular Mycobacterium tuberculosis. Scientific Reports, 8 (8506). pp. 1-13. ISSN 2045-2322

Mycological Typing Techniques

Mycotoxin

Mycotoxin bioassay

N. vespilloides

Miller, Charlotte and Cotter, Sheena (2018) Resistance and tolerance: the role of nutrients on pathogen dynamics and infection outcomes in an insect host. Journal of Animal Ecology, 87 (2). pp. 500-510. ISSN 0021-8790

NLTK

Near-wall

Nectria

Negibacteria

Nicrophorus vespilloides

Duarte, Ana, Cotter, Sheena, De Gasperin, Ornella, Houslay, Thomas M., Boncoraglio, Giuseppe, Welch, Martin and Kilner, Rebecca M. (2017) No evidence of a cleaning mutualism between burying beetles and their phoretic mite. Scientific Reports, 7 . p. 13838. ISSN 2045-2322

Nitrate concentration

Nitrate reduction

Nitrite Reductases

Nitrite reductase genes

Nitrite reductase genes, Estuaries, messenger RNA

Nitrogen

Nitrogen Compounds

Nitrogen Fixation

Nitrogen compounds

Nitrogen removal

NotOAChecked

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Nucleic Acid Conformation

Nucleic Acid Hybridization

Nutrient gradients

Nutrient inputs

Guadayol, Oscar, Marrase, Celia, Peters, Francesc, Berdalet, Elisa, Roldan, Cristina and Sabata, Anna (2009) Responses of coastal osmotrophic planktonic communities to simulated events of turbulence and nutrient load throughout a year. Journal of Plankton Research, 31 (6). pp. 583-600. ISSN 0142-7873

Nutrients

Nutritional supplements

Ochrobactrum

Ochrobactrum anthropi

Oleispira antarctica

Oligonucleotide Probes

Oprf porin

Organic carbon

Outer membrane proteins

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Oxidation-Reduction

P. luminescens

PDR12

Paracoccus

Partition systems

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Pathogen

Pathogens

Ortali, Arianna, Wright, Jonathan and Onarinde, Bukola (2021) Effect of UV-C on Escherichia coli, Staphylococcus aureus, Salmonella Typhimurium and SARS-CoV-2 Virus Surrogate (MS2 bacteriophage) Inoculated onto Stainless Steel Surface. In: World Microbe Forum, 20 - 24 June 2021, Online.

Peas

Penicillium minioluteum

Peptides, Cyclic

Pesticides

Pharmacogenetics

Phosphates

Phosphatidylinositol bisphosphate

Phospholipids

Photoautotrophs

Phylogeny

Pilot scale

Pipe

Pipe flow

Pisum sativum

Planktonic bacterivory

Plant Diseases

Plasmid

Crewe, Nicola (2004) Plasmid Instability: Measurement and Use in Antimicrobial Action. PhD thesis, University of Hertfordshire.

Plasmids

Plasmids, Bacteria (microorganisms)

Plasmodium

National University of Singapore (2012) Synthesis and use of fluorophore-tagged antimalarials. US20120100555 A1.

Plasmodium falciparum

Ch'ng, J.-H., Kotturi, S. R., Chong, A. G.-L., Lear, Martin J. and Tan, K. S.-W. (2010) A programmed cell death pathway in the malaria parasite Plasmodium falciparum has general features of mammalian apoptosis but is mediated by clan CA cysteine proteases. Cell Death and Disease, 1 (2). e26. ISSN 2041-4889

Poecilochirus carabi

Polymerase Chain Reaction

Polymorphism, Restriction Fragment Length

Polymyxin B

Polysaccharides

Population

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Posibacteria

Potable water

Primary production

Process activities

Process control

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Prokaryota

Prokaryotic

Miller, Clare (2015) Bacterial biofilms: strength in union. Biological Sciences Review, 28 (2). ISSN 0953-5365

Protein kinase

Truman, A. W., Millson, S. H., Nuttall, J. M., Mollapour, M., Prodromou, C. and Piper, P. W. (2007) In the yeast heat shock response, Hsf1 directed induction of Hsp90 facilitates the activation of the Slt2 (Mpk1) mitogen-activated protein kinase required for cell integrity. Eukaryotic Cell, 6 (4). pp. 744-752. ISSN 1535-9778

Protein level

Proteins

Proteobacteria

Hofmann, Tanja, Hanlon, Astrid R. M., Taylor, Joe D., Ball, Andrew S., Osborn, A. Mark and Underwood, Graham J. C. (2009) Dynamics and compositional changes in extracellular carbohydrates in estuarine sediments during degradation. Marine Ecology Progress Series, 379 . pp. 45-58. ISSN 0171-8630

Proteomics

Goncheva, Mariya I., Conceicao, Carina, Tuffs, Stephen W., Lee, Hui-Min, Quigg-Nicol, Marlynne, Bennet, Ian, Sargison, Fiona, Pickering, Amy C., Hussain, Saira, Gill, Andrew C., Dutia, Bernadette M., Digard, Paul, Fitzgerald, J. Ross and Palese, Peter (2020) Staphylococcus aureus Lipase 1 Enhances Influenza A Virus Replication. mBio, 11 (4). ISSN 2150-7511

Graham, Ciaren, Graham, R. L. and McMullan, G. (2011) Proteomics in the microbial sciences. Bioengineered Bugs, 2 (1). pp. 17-30. ISSN 1949-1018

Protista

Pseudoalteromonas

Pseudomonas

Andreani, Nadia and Fasolato, Luca (2016) Pseudomonas and related genera. In: The microbiological quality of food: foodborne spoilers. Woodhead Publishing Series in Food Science, Technology and Nutrition . Elsevier, pp. 7-54. ISBN 9780081005026, 9780081005033

Pseudomonas aeruginosa

Bramston, D. M. and Dixon, Ron (2009) Analysis of textural attachment preferences of Pseudomonas aeruginosa ATCC27853 to blast furnace slag using confocal microscopy. In: 109th General Meeting, American Society for Microbiology, 17 -21 May 2009, Philadelphia, Pennsylvania.

Pseudomonas fluorescens

Pseudomonas fluorescens group

Pumpkin seeds

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Pyrimidines

Python

Quality of butter

Quantitative PCR

RAPD-PCR

RNA

RNA 16S

RNA 16S, abundance

RNA 16S, ammonification

RNA 16S, article

RNA 16S, bacterium

RNA 16S, denitrification

RNA 16S, microbial community, agriculture

RNA 18S, arbuscular mycorrhiza

RNA fingerprinting

RNA sequence

RNA, Acinetobacter

RNA, Antisense

RNA, Bacterial

RNA, Good agricultural practice (GAP)

RNA, Messenger

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

RNA, Polymorphism, Soils, RNA 16S, bacterial disease

RNA, Ribosomal, 16S

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

RNA, Ribosomal, 18S

RNA, ammonification

RNA, amplicon

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Radicicol

Radiolabelled

Recombinases

Recombination, Genetic

Refrigerator

James, Christian, Daramola, Bukola and James, Steve (2017) The use and performance of household refrigerators: a review. Comprehensive Reviews in Food Science and Food Safety, 16 (1). pp. 160-179. ISSN 1541-4337

Regression analysis

Replication Origin

Reproducibility of Results

Republic of Congo

Resistance

Eales, Marcus (2015) The visualisation of interactions between Acinetobacter baumannii and the antimicrobial peptides: colistin sulphate, bicarinalin and BP100. MRes thesis, University of Lincoln.

Respiration

Reverse Transcriptase Polymerase Chain Reaction

Smith, Cindy J. and Osborn, A. Mark (2009) Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiology Ecology, 67 (1). pp. 6-20. ISSN 0168-6496

Reverse transcription

Review

Ribonuclease

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

Ribosome

Risk

River Humber

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) A survey of the prevalence of Vibrio parahaemolyticus in the River Humber on the East Coast of England. In: 108th American Society of Microbiology (ASM) General Meeting, 1st - 5th June 2008, Boston, USA.

Roseobacter

SARS-CoV-2

SARS-CoV-2 Virus Surrogate

SNAREs

SWD

Jones, R., Fountain, M. T., Günther, C. S., Eady, P. E. and Goddard, Matthew (2021) Separate and combined Hanseniaspora uvarum and Metschnikowia pulcherrima metabolic volatiles are attractive to Drosophila suzukii in the laboratory and field. Scientific Reports, 11 . p. 1201. ISSN 2045-2322

Saccaromyces cerevisiae

Saccharomyces

Saccharomyces cerevisiae

Saccharomyces cerevisiae, Saccharomyces cerevisiae

Saccharomycetaceae

Gunther, Catrin, Knight, Sarah, Jones, Rory and Goddard, Matthew (2019) Are Drosophila preferences for yeasts stable or contextual? Ecology and Evolution, 9 (14). pp. 8075-8086. ISSN 2045-7758

Salmonela enterica

Salmonella

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Sampling devices

Sanitation

Saudi Arabia

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Scanning electron microscopy

School meals

Seawater

Sediment resuspension

Sediments

Sediments, Bacterial community

Sediments, Gene sequences, Genes, DNA

Selective and Non-selective media

Senior High Schools

Sequence Analysis, DNA

Sequence Homology, Nucleic Acid

Sequence Homology, Nucleic Acid, Eurasia

Set theory

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Shelf-life of butter

Shewanella

Shewanella sp.

Siderophores

Simultaneous analysis, Biofilms

Skin

Skin measurements

Slaughter

Slurry experiment

Social evolution

Greig, Duncan and Goddard, Matthew (2015) Ecology: tribal warfare maintains microbial diversity. Current Biology, 25 (14). R618-R620. ISSN 0960-9822

Soil

Soil Bacteria

Suttey, Liam (2021) Swimming Mobility and Chemotaxis of Soil Bacteria. MRes thesis, University of Lincoln.

Soil Microbiology

Fernandez-Huarte, Matias, Elphinstone, John, Adams, Ian, Vicente, Joana, Bhogal, Anne, Watson, Christine, Dussart, Francois, Stockdale, Elizabeth, Walshaw, John, McGreig, Sam, Simmonds, Robert, Maskova, Lucie, Deeks, Lynda and Goddard, Matthew (2023) A DNA-barcode biodiversity standard analysis method (DNA-BSAM) reveals a large variance in the effect of range of biological, chemical and physical soil management interventions at different sites, but that location is one of the most important aspects determining the nature of agricultural soil microbiology. Soil Biology and Biogeochemistry, 184 . p. 109104. ISSN 0038-0717

Soil Microbiology, Bacteria (microorganisms)

Soil Pollutants

Species Specificity

Species Specificity, Bacteria (microorganisms)

Sphingomonas

Stainless steel

Staphylococcus aureus

Sti1p

Strategy

Streptococcus pneumoniae; Cefotaxime; moxifloxacin; azithromycin; Teixobactin-Arg10

Leonard, Anne, Möhlis, Kevin, Schlüter, Rabea, Taylor, Edward, Lalk, Michael and Methling, Karen (2020) Exploring metabolic adaptation of Streptococcus pneumoniae to antibiotics. The Journal of Antibiotics . pp. 1-14. ISSN 0021-8820

Streptomyces

Stress resistance

Stress response

Students

Sub-Saharan Africa

Substrate Specificity, Acinetobacter

Sulfolobus

Sulfur

Supershift

Supervision, Control system analysis

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Support, Non-U.S. Gov't

Support, Non-U.S. Gov't, Bacteria (microorganisms)

Swimming Mobility

Suttey, Liam (2021) Swimming Mobility and Chemotaxis of Soil Bacteria. MRes thesis, University of Lincoln.

Systems Theory

T-Lymphocytes

TRAP1

Taq polymerase, DNA Primers

Teixobactins

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Singh, Ishwar, Malkawi, Ruba, Iyer, Abhishek, Parmar, Anish, Lloyd, Daniel, Goh, E, Taylor, Edward, Sarmad, Sarir, Madder, A and Lakshminarayanan, R (2018) Cysteines and Disulfide-Bridged Macrocyclic Mimics of Teixobactin Analogues and Their Antibacterial Activity Evaluation against Methicillin-Resistant Staphylococcus Aureus (MRSA). Pharmaceutics, 10 (4). p. 183. ISSN 1999-4923

Tellurium

Temperate estuary

Temperature

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Temperature, Alcanivorax

Terrestrial runoff

Thailand, Bacteria (microorganisms)

Thalassolituus

Thalassolituus oleivorans

Thermal treatment

Time Factors

Time series

Time-temperature

Tolerance

Trachea

Traditional butter

Training

Trans-Activators

Trans-Activators, Bacteria (microorganisms)

Transcription

Transcription factor

Millson, S. H., Truman, A. W. and Piper, P. W. (2003) Vectors for N- or C-terminal positioning of the yeast Gal4p DNA binding or activator domains. BioTechniques, 35 (1). pp. 60-64. ISSN 0736-6205

Transcription, Estuarine sediments

Transcription, Genetic

Transfer functions, Discrete event systems

Paoli, Andrea and Lafortune, Stephane (2005) Safe diagnosability for fault-tolerant supervision of discrete-event systems. Automatica, 41 (8). pp. 1335-1347. ISSN 0005-1098

Translation

Transposases

Transposon Resolvases

Treatment-specific shifts, Biofilms, beta glucosidase

Trees

Triticum aestivum

Triticum, Bacteria (microorganisms)

Tropical Climate, Africa

Troubleshooting

Tuberculosis

Dixon, R. A. (2009) Tuberculosis: molecular diagnosis of past populations. In: IBMS Biomedical Sciences Congress, 28 - 30 September 2009, Birmingham, UK.

Turbulence in laboratory containers

Guadayol, Oscar, Peters, Francesc, Stiansen, Jan Erik, Marrase, Celia and Lohrmann, Atle (2009) Evaluation of oscillating grids and orbital shakers as means to generate isotropic and homogeneous small-scale turbulence in laboratory enclosures commonly used in plankton studies. Limnology and Oceanography: Methods, 7 (4). pp. 287-303. ISSN 1541-5856

Tyrosine, Bacteria (microorganisms)

URTI

UV

UVC

Ultrasound imaging

Ultraviolet light

United Kingdom

United Kingdom, Bacterial Proteins

United Kingdom, Biodegradation, Environmental

United States

United kingdom, Ammonium compounds

Upogebia deltaura

VADER

VRE

Singh, Ishwar and Walden, Benjamin (2018) Simplified teixobactin analogues to target superbugs. Future Medicinal Chemistry, 10 (2). ISSN 1756-8919

Variation (Genetics)

Variation (Genetics), Bacteria (microorganisms)

Variation (Genetics), United Kingdom, Bacteria (microorganisms)

Variovorax

Verapamil

Vesicle leakage

Vibrio

Vibrio parahaemolyticus

Daramola, Bukola, Dixon, Ron and Williams, D. R. (2008) Antibiotic susceptibility of Vibrio parahaemolyticus: a surveillance study. In: American Society of Microbiology conference on antimicrobial resistance in zoonotic bacteria and foodborne pathogens, 15th - 18th June 2008, Copenhagen, Denmark.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Society for General Microbiology Meeting, 30th March - 2nd April 2009, Harrogate, United Kingdom.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Antibiotic susceptibility of recent environmental Vibrio parahaemolyticus isolates from the UK. In: Infection 2009 - Federation of Infection Societies, 11th - 13th November 2009, Birmingham, UK.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2009) Environmental distribution and molecular analysis of Vibrio parahaemolyticus isolated from the East Coast region of England. In: Infectious Diseases Society of America Meeting, 29th October - 1st November 2009, Philadelphia, USA.

Daramola, Bukola, Williams, D. R. and Dixon, Ron (2008) Improved detection of environmental Vibrio parahaemolyticus through the use of chromogenic media. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

Vibrio sp.

Vibrio, Alphaproteobacteria

Viola (angiosperm), Anti-Bacterial Agents

Viral Load

Virulence, Fungi

Virus Replication, Gallid herpesvirus 2

Viscosity, Colpidium striatum

Wastewater treatment, Nitrates, ammonia

Water Microbiology

Water Microbiology, Bacteria (microorganisms)

Water Microbiology, Colne Estuary

Water Pollutants, Chemical, Bacteria (microorganisms)

Water Pollution, Chemical

Water Supply, Bacteria (microorganisms)

Water activity

Onarinde, Bukola (2021) Survival of Salmonella Enteritidis Phage Type 30 on Brazil nuts and pumpkin seeds stored at 8, 23, and 37°C. Journal of Food Protection . ISSN 0362-028X

Water distribution systems

Water supply, Biofilters, 4',6 diamidino 2 phenylindole

Waves

Weak acid

Western Europe, Bacillariophyta

Western Europe, Bacteria (microorganisms)

Western Europe, Deltaproteobacteria

World, Bacteria (microorganisms)

Wound healing

Wounds

Y-chromosonal STR

Yeast

Knight, Sarah J. and Goddard, Matthew R. (2016) Sporulation in soil as an over-winter survival strategy in Saccharomyces cerevisiae. FEMS Yeast Research, 16 (1). ISSN 1567-1356

Millson, Stefan H. and Evans, Ivor Howell (2007) Multiple dextranases from the yeast Lipomyces starkeyi. Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology, 92 . pp. 399-404. ISSN 0003-6072

Zambia

Zea mays

ac

Williams, D. Ross, Thomas, Angela E., Hepburn, Neil C., Watts, Toni and Dixon, Ron A. (2004) Changes in skin microbiota of patients associated with treatment by Isotretinoin. In: 43rd Interscience Conference on Antimicrobial Agents and Chemotherapy, November 2004, Washington, DC.

accessory genome

Andreani, Nadia, Hesse, Elze and Vos, Michiel (2017) Prokaryote genome fluidity is dependent on effective population size. The ISME Journal (11). pp. 1719-1721. ISSN 1751-7362

acclimatization

acne

Dixon, Ron A., Thomas, Angela E., Watts, Toni, Hepburn, Neil C. and Williams, D. Ross (2004) Treatment of acne patients with Isotretinoin: related changes in skin microbiota. In: 6th European Congress of Chemotherapy and Infection, November, 2004, Paris, France.

Thomas, Angela E., Williams, D. Ross, Watts, Toni, Hepburn, Neil C. and Dixon, Ron A. (2008) Investigation of the changing colonisation of skin bacteria during isotretinoin treatment for Acne vulgaris. In: Meeting - Society for General Microbiology, 31 March to 01 April 2008, Edinburgh.

acne vulgaris

Ryan-Kewley, Angela E. (2011) Microbial ecology of Propionibacterium acnes in patients undergoing treatment with isotretinoin. PhD thesis, University of Lincoln.

Thomas, A. E., Williams, D. R., Watts, T., Hepburn, N. C . and Dixon, Ron (2008) Investigation into the changing colonisation of skin bacteria during isotretinoin treatment for acne vulgaris. In: Society for General Microbiology Meeting, 31st March - 3rd April 2008, Edinburgh.

actin

active site

Walker, Daniel, Lancaster, Lorna, James, Richard and Kleanthous, Colin (2004) Identification of the catalytic motif of the microbial ribosome inactivating cytotoxin colicin E3. Protein Science, 13 (6). pp. 1603-1611. ISSN 0961-8368

adaptation

Goddard, M. R. and Greig, D. (2015) Saccharomyces cerevisiae: a nomadic yeast with no niche? FEMS Yeast Research, 15 (3). ISSN 1567-1356

adherance

agricultural management

agricultural procedures

airway epithelial cell

alpha interferon

alternative model

Kay, Sammy, Edwards, Joseph, Brown, Joseph and Dixon, Ron (2019) Galleria mellonella Infection Model Identifies Both High and Low Lethality of Clostridium perfringens Toxigenic Strains and Their Response to Antimicrobials. Frontiers in Microbiology, 10 (1281). ISSN 1664-302X

amber

Cotton, G. and Dixon, R. A. (2011) Recovery of 'ancient' microbes from amber: an experimental approach. In: 7th National FORREST Conference, 29 - 30 June 2011, Nottingham, UK.

amino acids

aminopeptidase

Sala, Maria Montserrat, Arin, Laura, Balague, Vanessa, Felipe, Jordi, Guadayol, Oscar and Vaque, Dolors (2005) Functional diversity of bacterioplankton assemblages in western Antarctic seawaters during late spring. Marine Ecology Progress Series, 292 . pp. 13-21. ISSN 0171-8630

ammonium

amplicon sequencing

Harrison, XA, McDevitt, A, Dunn, Jenny, Griffiths, S, Benvenuto, C, Birtles, RJ, Boubli, JP, Bown, K, Bridson, C, Brooks, DR, Browett, SS, Carden, R, Clever, F, Coscia, I, Edwards, KL, Ferry, N, Goodhead, IB, Highlands, A, Hopper, J, Jackson, J, Jehle, R, Kaizer, M, King, T, Lea, J, Lenka, JL, McCubbin, A, McKenzie, J, Moraes, B, O'Meara, D, Pescod, P, Preziosi, RF, Rowntree, JK, Shultz, S, Silk, M, Stockdale, JE, Symondson, WOC, de lan Pena, M, Walker, S, Wood, M, Meade, E and Antwis, RE (2021) Fungal microbiomes are determined by host phylogeny and exhibit widespread associations with the bacterial microbiome. Proceedings of the Royal Society B: Biological Sciences, 288 (1957). p. 20210552. ISSN 0962-8452

amplicons sequencing

amyloid beta protein1-40

amyloid beta protein1-42

amyloid forming host defence peptide

ancient DNA

Dixon, Ron, Dawson, Lucy and Taylor, Delia (2008) The experimental degradation of archaeological human bone by anaerobic bacteria and the implications for recovery of ancient DNA. In: The 9th International Conference on Ancient DNA and Associated Biomolecules, 19-22 October 2008, Pompeii, Italy.

animal experiment

animal model

animal tissue

antibacterial

Parmar, Anish, Iyer, Abhishek, Prior, Stephen H., Lloyd, Daniel G., Goh, Eunice, Vincent, Charlotte, Palmai-Pallag, Timea, Bachrati, Csanad, Breukink, Eefjan, Madder, Annemieke, Lakshminarayanan, Rajamani, Taylor, Edward J. and Singh, Ishwar (2017) Teixobactin analogues reveal enduracididine to be non-essential for highly potent antibacterial activity and lipid II binding. Chemical Science, 8 (12). pp. 8183-8192. ISSN 2041-6520

antibacterial activity

Barnes, K. M., Gennard, D. E. and Dixon, R. A. (2009) Investigation into the antibacterial activity in excretion/secretions (ES) from four insects associated with a corpse. In: Royal Entomological Society Meeting, insect infection and immunity, 15 - 17 July 2009, Sheffield, UK.

Barnes, Katherine, Gennard, Dorothy and Dixon, Ron (2008) Differences in the antibacterial activity of Lucilia sericata (M) larval excretion/secretion compared to Calliphora vicina (R-D), Tenebrio molitor (l) and Dermestes maculatus (D). In: 108th American Society of Microbiology (ASM) General Meeting, 1st - 5th June 2008, Boston, USA.

Dixon, R. A. and Baron, Mark (2011) A novel silver colloid: assessment of antibacterial activity. In: 27th International Congress of Chemotherapy, 07 - 10 May 2011, Milan, Italy.

antibacterial potency

antibiotic resistance

Dixon, Ron (2008) Outer membrane protein analysis of ampicillin-resistant isolates of Haemophilus influenzae from Saudi Arabia. Journal of Infection and Public Health, 1 (1). pp. 45-50.

Lloyd, Daniel (2021) Investigating the potential of pre-clinical cell-wall synthesis inhibiting antibiotics. PhD thesis, University of Lincoln.

antibiotic susceptibility

antibiotics

Fiers, William D., Craighead, Mark and Singh, Ishwar (2017) Teixobactin and its analogues: a new hope in antibiotic discovery. ACS Infectious Diseases, 3 (10). pp. 688-690. ISSN 2373-8227

Lloyd, Daniel (2021) Investigating the potential of pre-clinical cell-wall synthesis inhibiting antibiotics. PhD thesis, University of Lincoln.

antiinfective agent

antimicrobial

antimicrobial peptides

antimicrobial resistance

James, Christian, Dixon, Ron, Talbot, Luke, James, Stephen, Williams, Nicola, Onarinde, Bukola, UNSPECIFIED and UNSPECIFIED (2021) Assessing the impact of heat treatment of food on antimicrobial resistance genes and their potential uptake by other bacteria - A critical review. Antibiotics, 10 (12). p. 1440. ISSN 2079-6382

antimicrobial resistance gene

antimicrobials

antioxidant activity

arbuscular mycorrhiza

aromatic hydrocarbon

article

Osborn, A. M., Bruce, K. D., Strike, P. and Ritchie, D. A. (1995) Sequence conservation between regulatory mercury resistance genes in bacteria from mercury polluted and pristine environments. Systematic and Applied Microbiology, 18 (1). pp. 1-6. ISSN 0723-2020

asthma

atomic force microscopy

autosomal STR

autotrophy

azoxystrobin

bacteria

Lloyd, Daniel (2021) Investigating the potential of pre-clinical cell-wall synthesis inhibiting antibiotics. PhD thesis, University of Lincoln.

Omoigberale, May (2021) Evaluating the impact of alternative antimicrobials on biofilms formed by Clostridium perfringens. PhD thesis, University of Lincoln.

bacteria in experimental degradation

Taylor, D. and Dixon, Ron (2010) Destruction of archaeological bone: the role of specific bacteria in experimental degradation of 700 year old human bone. Journal of Nordic Archaeological Sciences .

bacterial DNA

bacterial activity

bacterial community

bacterial count

bacterial flora

bacterial gene

bacterial genetics

bacterial growth

bacterial membrane

bacterial membranes

Dixon, Ron and Sahalan, Ahmad Z. (2008) Role of the cell envelope in the antibacterial activities of polymyxin B and polymyxin B nonapeptide against Escherichia coli. International Journal of Antimicrobial Agents, 31 (3). pp. 224-227. ISSN 0924-8579

bacterial metabolism

bacterial outer membrane

bacterial protein

bacterial shape

Guadayol roig, Oscar, Thornton, Katie L. and Humphries, Stuart (2017) Cell morphology governs directional control in swimming bacteria. Scientific Reports, 7 . p. 2061. ISSN 2045-2322

bacteriophage

bacterioplankton abundance

bacterium

bacterium colony

bacterium isolate

bacterium isolation

benthic environment

benthos

benzoquinone ans amycins radicicol

Piper, Peter and Millson, Stefan (2012) Spotlight on the microbes that produce heat shock protein 90-targeting antibiotics. Open Biology, 2 (DEC). ISSN 2046-2441

beta interferon

binding affinity

bioassays

bioavailability

biodegradation

biodiversity

biofilm

Omoigberale, May (2021) Evaluating the impact of alternative antimicrobials on biofilms formed by Clostridium perfringens. PhD thesis, University of Lincoln.

biofilms; denaturing gradient gel electrophoresis;drinking water; enumeration; water age; water quality

Sekar, R., Deines, P., Machell, J., Osborn, M. A., Biggs, C. A. and Boxall, J. B. (2012) Bacterial water quality and network hydraulic characteristics: a field study of a small, looped water distribution system using culture-independent molecular methods. Journal of Applied Microbiology, 112 (6). pp. 1220-1234. ISSN 1364-5072

biolog

biological activity

biological model

biomass

bioprocessing

Molina, Gustavo, Gupta, Vijai, Singh, Brahma and Gathergood, Nicholas, eds. (2020) Bioprocessing for Biomolecules Production. Wiley. ISBN 9781119434320

bioremediation

bioturbation

Laverock, Bonnie, Gilbert, Jack A., Tait, Karen, Osborn, A. Mark and Widdicombe, Steve (2011) Bioturbation: impact on the marine nitrogen cycle. Biochemical Society Transactions, 39 (1). pp. 315-320. ISSN 0300-5127

bladder biopsies

bmjconvert

bmjdoi

Hart, M. C., Elliott, G. N., Osborn, A. Mark, Ritchie, D. A. and Strike, P. (1998) Erratum: Diversity amongst Bacillus merA genes amplified from mercury resistant isolates and directly from mercury polluted soil (FEMS Microbiol. Ecol. 27 (1998) (73-84] PII: S0168649698000580). FEMS Microbiology Ecology, 27 (4). p. 395. ISSN 0168-6496

bmjgoldcheck

bmjtype

body size

body temperature

botulinum neurotoxin

burrow

cancer

Lancaster, Lorna, Wintermeyer, Wolfgang and Rodnina, Marina (2007) Colicins and their potential in cancer treatment. Blood, Cells, Molecules and Diseases, 38 (1). pp. 15-18. ISSN 1079-9796

carbohydrate

Cotter, Sheena and Al Shareefi, Ekhlas (2022) Nutritional ecology, infection and immune defence - exploring the mechanisms. Current Opinion in Insect Science . ISSN 2214-5745

Haynes, K., Hofmann, T. A., Smith, C

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