Gao, David Z., Federici Canova, Filippo, Watkins, Matthew B. and Shluger, Alexander L. (2015) Efficient parametrization of complex molecule-surface force fields. Journal of Computational Chemistry, 36 (16). pp. 1187-1195. ISSN 0192-8651
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Item Type: | Article |
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Item Status: | Live Archive |
Abstract
We present an efficient scheme for parametrizing complex molecule-surface force fields from ab initio data. The cost of producing a sufficient fitting library is mitigated using a 2D periodic embedded slab model made possible by the quantum mechanics/molecular mechanics scheme in CP2K. These results were then used in conjunction with genetic algorithm (GA) methods to optimize the large parameter sets needed to describe such systems. The derived potentials are able to well reproduce adsorption geometries and adsorption energies calculated using density functional theory. Finally, we discuss the challenges in creating a sufficient fitting library, determining whether or not the GA optimization has completed, and the transferability of such force fields to similar molecules. © 2015 Wiley Periodicals, Inc.
Keywords: | Adsorption, Genetic algorithms, Molecular modeling, Molecules, Optimization, Quantum theory, Adsorption energies, Adsorption geometries, Complex molecules, Efficient schemes, Force fields, Organic molecules, QM/MM, Quantum mechanics/molecular mechanics, Density functional theory, NotOAChecked |
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Subjects: | F Physical Sciences > F165 Biomolecular Chemistry |
Divisions: | College of Science > School of Mathematics and Physics |
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ID Code: | 17693 |
Deposited On: | 08 Apr 2016 09:47 |
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